Shewanella litorisediminis: JQC75_04880
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Entry
JQC75_04880 CDS
T07182
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
slit
Shewanella litorisediminis
Pathway
slit00260
Glycine, serine and threonine metabolism
slit00460
Cyanoamino acid metabolism
slit00630
Glyoxylate and dicarboxylate metabolism
slit00670
One carbon pool by folate
slit00680
Methane metabolism
slit01100
Metabolic pathways
slit01110
Biosynthesis of secondary metabolites
slit01120
Microbial metabolism in diverse environments
slit01200
Carbon metabolism
slit01230
Biosynthesis of amino acids
slit01240
Biosynthesis of cofactors
slit04981
Folate transport and metabolism
Module
slit_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JQC75_04880
09102 Energy metabolism
00680 Methane metabolism
JQC75_04880
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JQC75_04880
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JQC75_04880
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JQC75_04880
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JQC75_04880
Enzymes [BR:
slit01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JQC75_04880
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QRH02759
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Position
1107910..1109163
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AA seq
417 aa
AA seq
DB search
MLKKTMNIADYDPELFKAIEDETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVETLAIERAKELFGATFANVQPHSGSQANSAVYMTLLKPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIIPYGIDETGKIDYDEMERLAVEHKPKMMIGGFSAYSGI
VDWARMREIADKIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIIL
SAANDEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKVYQQQVVANAKAMVE
VFLERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGAANITVNKNSVPNDPRSPFITS
GIRIGTPAITRRGFKEAEARELTHWICDVLDNAKDESVIARVKGQVLELCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagaccatgaatattgccgactatgatcccgagctgttcaaggcgattgaa
gacgaaacccttcgccaggaagagcatatcgagctgattgcctccgagaactacacttct
ccccgcgtgatgcaggctcagggttcacagctgaccaacaagtacgccgaaggttatcct
gggaagcgttactatggtggctgtgagtacgtcgacatcgtggaaaccctggccattgag
cgcgccaaagaactcttcggtgccactttcgccaacgtacagccacactccggttctcag
gccaacagcgccgtgtacatgaccctgctcaagccaggtgacactgtactgggtatgaac
ctggcccacggtggtcacctgactcatggctcaccggttaacttttctggcaaactgtac
aacatcattccttacggcatcgatgaaaccggcaagattgactacgacgaaatggagcgt
ctggccgttgagcacaagccaaagatgatgattggcggtttctctgcctactctggcatc
gttgactgggcccgcatgcgtgaaatcgccgacaagattggcgcttacctgtttgtggac
atggcccacgtggccggtctcgtggccgccggtgtgtatccaaacccggttccacacgct
cacgtagtgacctctaccactcacaagaccctggccggtccccgtggcggtatcattctg
tctgctgccaacgacgaagacctgtacaagaagctgaactcagcggtattcccgggtggt
cagggcggcccgctgatgcacgttatcgccggtaaagcggtcgccttcaaagaagcgctg
gagcctgagttcaaggtgtatcagcagcaggtagttgccaacgccaaggccatggtggaa
gtgttccttgagcgcggttacaagatagtctccggcggtaccgacaaccacctgatgctg
gtggacctgattggccgcgacctgaccggtaaagaagccgacgcggctctgggcgctgcc
aacatcaccgtgaacaaaaactcagtgccaaacgacccacgttctcctttcatcacttcc
ggtatccgtatcggtaccccagccatcacccgccgcggtttcaaagaagccgaagcacgt
gagctgactcactggatctgtgatgtactggacaatgccaaagacgagagtgtgattgca
cgcgtaaaaggtcaggtactggaactgtgcgctcgtttccctgtttacggttaa
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