Shewanella litorisediminis: JQC75_04925
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Entry
JQC75_04925 CDS
T07182
Name
(GenBank) nodulation protein NfeD
KO
K07403
membrane-bound serine protease (ClpP class)
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99975 Protein processing
JQC75_04925
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NfeD
Motif
Other DBs
NCBI-ProteinID:
QRH02767
LinkDB
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Position
1115625..1117181
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AA seq
518 aa
AA seq
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MFNRLFCPAVVRFLASIIGLFVLLLPPLFGGLSSAVAVSPPAAFSSGFILSDANIANTTA
LSDRAIGSNHSADSAAQVTSHQNVGARDIDGDVAPVWRLEVKGAIGPGVADYLIRTLSKA
QTQVMPPQLLLLTLDTPGGLVASLRDINQAILASDIPVACLVYPAGARAASAGTYMLYAC
HLAAMAPATSLGAATPVQLGPPTGGEQKDKEGEPQGASDMERKVLNDAVAYIKTLAELRG
RNAEWGEQAVREAATATATEALALGVIDLIAADPRALLEAIDGRRFEINGTIHVLNTRTA
QVLDAGPDWRATFLSTITNPNVAYVLMMLGIYGLLLEFYSPGIGVSGVVGAISLLVAMFA
LQMLPINYAGAGLLLLGIGLLVAESLVPSFGILGFGGVVAFVLGSLFLIDSELDAFRIAW
PLILALALASLLFFVLLLSMLLKQRRRAPVSGTEAMVGGRARVLHGFPGKGEVLFMGEHW
QGHCEHALRPGTLVRVEAIKGLLLELGPLDESKENQDG
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataggttgttctgccccgcggttgtccggtttctggcctcgataatcgggctg
tttgtattattactccccccgctgttcggcggtttgagctctgctgtggcggtaagccct
cctgctgctttttcctccggatttatcttaagcgacgccaacattgcaaacaccacggct
ctatcagaccgcgccattggctcaaaccattctgctgactcagccgctcaagtgacttca
caccaaaacgtgggtgcccgggacatcgatggtgatgtggcgcctgtgtggcgccttgag
gtaaaaggggccatagggcccggggtagcagactatcttatccgcaccctgagtaaggca
cagactcaggtcatgcctccccaactgctcttgctgacgctggataccccaggaggcttg
gtggcgagcctgagggacatcaatcaagccatccttgcctcagatatcccggtggcctgc
ctggtgtatcccgccggtgcccgcgccgccagtgccggaacctatatgctctatgcctgt
catctggcagcaatggcgcctgctaccagcttgggggctgcaacgccggtgcaactcgga
ccgccaacggggggcgagcagaaggataaggaaggtgaaccgcagggggcgtcggatatg
gagcgtaaggtccttaacgatgccgtggcctatatcaagacgctggcagagcttcggggg
cggaatgccgaatggggcgagcaggcagtgcgcgaagccgccactgccaccgccactgag
gcactggcgttgggggttatagatctgattgccgccgatcccagagcattgcttgaggcc
attgatggtcgcaggtttgagattaatggaaccatccacgtcttgaataccaggactgca
caggtgttggatgctggacccgactggcgcgcgacttttctaagcaccatcaccaacccc
aatgtggcttatgtcctcatgatgctgggtatctatggcttgctgttggagttctacagc
ccgggtattggggtttccggcgtggtgggggctatcagtttactcgtggccatgtttgca
ctgcaaatgttgccaattaactacgcgggtgcgggtctcttgcttttggggattgggttg
ctggtggctgaatcattggtgccgagcttcggcatactcggtttcggtggggtagtggcc
tttgtgttgggttccctctttcttatcgacagtgagttggatgcttttcgcatagcctgg
ccactgattctggcgctggcgctggcgagcctgctgttttttgtcttgctgctatccatg
ttgcttaaacagcgccgaagagcgcctgtcagtggtactgaggccatggtgggcggcagg
gcacgggtgctccatggttttcccggtaaaggtgaggtgctttttatgggagagcactgg
cagggccactgtgaacatgccttgcggccgggaaccttagtcagggttgaggcgattaag
gggctcttgctggagcttggcccgctcgacgaatcaaaggagaaccaagatgggtga
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