Shewanella litorisediminis: JQC75_04950
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Entry
JQC75_04950 CDS
T07182
Name
(GenBank) LysR family transcriptional regulator
KO
K18927
LysR family transcriptional regulator, L-lactate utilization regulator
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slit03000
]
JQC75_04950
Transcription factors [BR:
slit03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JQC75_04950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HVO_A0261_N
HTH_20
HTH_IclR
HemN_C
HTH_30
wHTH-PRTase_assc
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QRH02772
UniProt:
A0ABX7G6D6
LinkDB
All DBs
Position
1122835..1123737
Genome browser
AA seq
300 aa
AA seq
DB search
MREHPGSELELIYLFVQLVDAGSLSAVADRLSMPVATVSRKLSRLEENRGRQLLMRSTRK
IRLTEEGMALYERYKSLVSAVDALYGDGEDPLEGTLRIAAPISIISMIFMKTINEFRREY
PGIRLHITQKNEVVDLIDKGIDIAIVGGIQPDSSWIAVPLGTLDYRLVASPGYLQRRGMP
GHPSNLAAHDIIKVWPLYNWSLRHPQGEAFYYDGPASLTLTDLQGAISACVDDGGILYGP
ELFFKQELQRGLLLPVLPQWRGETRRISILCHQRQQQPAKVKAFIDFMKARAPGLFAMDA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagagagcatccgggcagcgaacttgaactgatttacctctttgtgcagttggtggat
gcgggcagcctttctgcggtggcagaccgattgtccatgcccgtggcaaccgtcagtcgc
aaactgtcccgcctggaagaaaaccgcggccgtcagctattgatgcgaagcacccgcaaa
attcgccttaccgaagaaggtatggcgctttacgagcgctacaaatcccttgtgagtgct
gtggatgccctttacggtgatggcgaagacccgctcgaaggcacgctgcgtattgctgcc
cccatctccatcatctcgatgatttttatgaagaccatcaacgagtttcgtcgcgaatat
cccgggatcaggctgcatatcacccaaaaaaatgaggtggtcgaccttatagacaagggc
atagatatcgccatcgtgggcggtattcagccggattcgtcctggattgcggtgccgctt
gggacacttgattaccgcctggtggcatcgccggggtatctgcagcgccggggcatgccc
gggcacccaagtaacctcgcagcccacgatattattaaggtttggcccttatataattgg
tcgctgaggcatcctcagggcgaggccttctattatgacggccccgcaagcctgacgctg
accgacttacagggagcaatcagtgcctgtgtcgatgatggtggcattttgtatgggccg
gagctcttctttaagcaggagctgcaacgcggcctgctgttgcctgttttgccacagtgg
cggggagaaacgcggcggatttcgattttgtgtcaccaacggcagcaacaacccgccaag
gtgaaggcctttatcgattttatgaaggcgcgggcgccggggttatttgccatggacgct
taa
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