KEGG   Shewanella litorisediminis: JQC75_05010
Entry
JQC75_05010       CDS       T07182                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
slit  Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:slit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:slit03016]
    JQC75_05010 (truD)
Enzymes [BR:slit01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     JQC75_05010 (truD)
Transfer RNA biogenesis [BR:slit03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    JQC75_05010 (truD)
 Prokaryotic type
    JQC75_05010 (truD)
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: QRH02783
LinkDB
Position
1137139..1138230
AA seq 363 aa
MTELTYLYGKPAVTADIRTHNSDFQVKEILPFLPDGEGEHHLLHIRKDGLNTAQVAEMIS
KFAKVHPKEVTFAGQKDKNAITEQWFGVRIPGKETPDWSAMSNEQMQVLSFARHGKKLRT
GALSGNRFTLVLRNVSDPQALVARLEQVRDGGVPNYFGEQRFGHDGGNLIKARQMFEGRK
VKDRNKRSLYLSAVRSELFNQVVSARLSKQDDSGLGLLEGDCVMLSGSRSFFVAESWDDT
LRGRLAEQDIQLSAPLWGRGEPLAKGEAAEFEASVLASYELERNGLEKEGLTQERRALLL
RPEQMSFKLDDDTLTLDFCLPAGAFATSVLRELCEYTDVKELEWRRAVAERQAQEAVDAP
AGE
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgactgagctgacttatctctacggcaagccggctgtaaccgccgatatccgcacccat
aacagcgattttcaggtgaaggaaatcctgccgttcctgcccgatggtgagggcgagcac
cacctgctgcatatccgcaaagacggcctgaacacggctcaggtggcggagatgatttcc
aaatttgccaaagtgcatcccaaggaagtgacctttgccggtcaaaaagacaaaaacgcc
atcaccgagcagtggtttggcgtgcgtattcccggcaaggaaaccccggattggagcgcc
atgagcaatgagcagatgcaggtgttgtcgtttgcccgccatggtaaaaaactgcgcacc
ggcgcgctttccggcaatcgctttaccctggtactgcgcaacgtttctgacccacaggcg
ttggttgcacggcttgagcaggtgcgtgatggtggcgtgcccaactattttggtgagcaa
cgttttggccacgatggtggcaatctgattaaggcgcggcagatgttcgaaggccgcaag
gtcaaagacagaaacaagcgcagcctgtacctctcggctgtgcgctcagagctctttaat
caggtggtcagcgcccgcttgtcaaagcaggatgactccggtttgggtctgctcgaaggt
gactgtgtgatgctctctggcagtcgcagcttctttgtggccgaaagctgggatgacact
ttaagaggccgtctggccgagcaggacattcagctgtccgcacccttatggggccggggg
gaaccgcttgccaagggcgaagccgcggagtttgaagcttccgtgctggcttcctatgag
cttgagcgtaatggccttgaaaaagaaggcctgacccaggagcgccgcgcgctgctgctg
cgccctgagcagatgagcttcaaactggatgacgacaccctgaccctggatttctgcctg
ccggccggcgcttttgccaccagtgtgctcagagagctttgtgagtacacagacgtgaaa
gagttggagtggcgccgtgcggtagccgagcgtcaggcacaggaggcggtcgatgcgcct
gctggtgagtaa

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