Shewanella litorisediminis: JQC75_05850
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Entry
JQC75_05850 CDS
T07182
Name
(GenBank) DeoR/GlpR transcriptional regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slit03000
]
JQC75_05850
Transcription factors [BR:
slit03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
JQC75_05850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_PafC
HTH_AsnC-type
HTH_Mga
HTH_23
Rrf2
Sigma70_r4
DUF4732
FeoC
PaaX
HTH_28
MarR
CggR_N
DUF977
DUF1670
HTH_Tnp_ISL3
Put_DNA-bind_N
Motif
Other DBs
NCBI-ProteinID:
QRH02930
LinkDB
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Position
1337543..1338325
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AA seq
260 aa
AA seq
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MNILNTIERQQEIVRLTQQQGKVSVSDLSARFGVSEVTIRSDLATLDQKQLLVRSRGGAI
VNTELSRELSLKEKGNCYSALKRELGAAAASLVQNGDRLLLDSGTTTEQVAHHLMQHDDL
IVMTNGLNIASVLSKSESVDVMLTGGLLRKKSMSFYGSAAEKSLGDYNFNKLILGVDGFD
LKAGLTTHFEKEACLNRMMVDIATEVIVVTDSSKFDQQAFHVICPLLRIHRLVTDTGIPE
RYAQALEKQGVQLHLVERTQ
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaacattctcaacaccatagagagacaacaggaaatcgtgcgcctgacccaacagcag
gggaaggtgtcggtgagcgatctgtcggcacgcttcggggtgtcagaggtcaccattcgc
agtgacctggcaaccctggatcaaaagcagttgctggtgcgctcccgtggcggcgccatc
gtcaatactgagctcagccgcgagttgtctcttaaggaaaagggcaattgctactcggct
ctgaaacgggaattgggcgcggcggcggcaagcctggtgcaaaacggtgaccggctgctt
ttggactcgggcaccaccacagagcaggtcgcccatcacctgatgcagcacgatgacctt
atcgtgatgaccaatgggctgaacattgcctctgtgctgtccaagtccgagtcggtggac
gtgatgctcaccggtggtctgctgcgcaaaaaatccatgtccttttacggcagcgccgcc
gagaagagcctgggtgactacaacttcaacaaacttattctcggtgtggacggtttcgac
ttgaaggccggactgaccacccattttgaaaaagaagcctgcctgaaccggatgatggtg
gacattgccaccgaggtgatagtcgtgacggattcatccaagtttgatcagcaggccttt
cacgtgatctgtcctttgcttcgcatacacaggctggtcacagacactggcattcctgag
cgttacgcccaggcactcgaaaaacaaggggtgcaattgcacctggtagaacgcactcaa
tag
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