Shewanella litorisediminis: JQC75_06045
Help
Entry
JQC75_06045 CDS
T07182
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slit03032
]
JQC75_06045 (hupB)
03036 Chromosome and associated proteins [BR:
slit03036
]
JQC75_06045 (hupB)
03400 DNA repair and recombination proteins [BR:
slit03400
]
JQC75_06045 (hupB)
DNA replication proteins [BR:
slit03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JQC75_06045 (hupB)
Chromosome and associated proteins [BR:
slit03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JQC75_06045 (hupB)
DNA repair and recombination proteins [BR:
slit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JQC75_06045 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Peptidase_M35
NTPase_P4
Motif
Other DBs
NCBI-ProteinID:
QRH02963
LinkDB
All DBs
Position
1389357..1389629
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEKIASGADISKAAAGRALDSFIAAVTEGLKDGGKISLVGFGTFEVRERAERTG
RNPQSGKEIKIPAAKIPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatctgaactgatcgagaaaattgcttctggtgccgacatttccaaggccgct
gccggtcgcgcattggactctttcatcgctgctgtgaccgaaggtctgaaggacggcggt
aaaatttccctggttggttttggtacttttgaagttcgtgagcgtgctgagcgtaccggc
cgtaacccacagtctggcaaagagatcaaaatccctgctgccaagatcccagcattcaaa
gctggtaaagctctgaaagacgcagtcaactga
DBGET
integrated database retrieval system
