Shewanella litorisediminis: JQC75_06590
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Entry
JQC75_06590 CDS
T07182
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
slit
Shewanella litorisediminis
Pathway
slit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JQC75_06590 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_06590 (msbA)
Enzymes [BR:
slit01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
JQC75_06590 (msbA)
Transporters [BR:
slit02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JQC75_06590 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
APS_kinase
NTPase_1
AAA_29
AAA_22
ABC_ATPase
RsgA_GTPase
AAA_16
nSTAND3
AAA_24
PCF11_RFEG_rpt
Sensor
Motif
Other DBs
NCBI-ProteinID:
QRH03069
LinkDB
All DBs
Position
1505809..1507608
Genome browser
AA seq
599 aa
AA seq
DB search
MTTAHNQEVWTVFKRLMGYLKPMKSIFIVSVLALLLYGAVDASFIAFIQPFIDKGFSGVG
MSGSVDMGNSSGFDSNNSVLFWAPFVVVGLFTLRGLANFVSTYGISYMSAKLIMDMRQQV
FEHYLTLPVSYIDKENSGNLISRVTFDTEQIARASGSALISIVRDGVTVMGMLALMFYNS
WKLSLCILIVGPIIGLVIATVSRRFRKISRQIQSAMGGVTAVTEQMIKGHKNVLAFGGQE
TESERFARVNDQNRHQNMKLAVAQAISQPTIMIIGSFALAFVLWAASFDALKSELTAGTF
ATVLAAMMATLQPIKNLTRVNAEFQRGIAACTTVFELLDTPSEADKGRFETDRVKGHVRF
DQVAFRYEGQENRALDGISFDVPPGKTLALVGRSGSGKSTIASLINRFYGGLEQGAIELD
GVNVEEYRLKNLRSQVALVSQQVTLFNDTIANNIAYACPWEVTREQIEQAATLAHAMEFI
SKLPNGLDTQVGENGVLLSGGQRQRIAIARAMLRNAPVLILDEATSALDTESEKAIQEGL
ENLRQNRTSIVIAHRLSTIESADEILVIEQGRIVERGCHKSLLAQDGMYAKLYQMQFTG
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgactacagctcataatcaggaagtttggacggtgttcaagcgtctcatggggtacctc
aaacccatgaagtccatctttatcgtctctgttctggcgcttttgctctatggcgcagtg
gacgccagctttattgcttttatccaaccctttattgataaaggcttttccggcgttggt
atgtcgggaagtgtcgacatgggcaactcatccggctttgactccaacaacagcgtgctg
ttttgggcaccctttgttgtagtggggctttttaccctgaggggcctggccaactttgtg
tctacctatggcatttcctatatgagcgccaagctcatcatggacatgcgccagcaggtg
tttgagcattatctgaccctgccggtgagctacatcgacaaggaaaactcgggcaacctg
atttcccgcgttaccttcgataccgaacaaatcgccagggcctccggcagcgcgcttatc
tccatcgtccgtgatggtgtgaccgtgatgggcatgttggcactgatgttttacaactcc
tggaaattgtccctctgtatcctgattgtcggccccatcataggattggtcatcgccact
gtgagccgccgcttccgcaaaatttcacggcaaattcaaagcgccatgggcggtgtcacc
gccgtgacagagcagatgatcaagggccataaaaacgtgttggcctttggcggacaggaa
accgagtccgagcgttttgccagggtgaacgatcagaatcgccatcagaacatgaagctt
gccgtggcccaggccatcagccagcccaccatcatgattatcggctccttcgcactggcc
tttgtgctctgggccgccagcttcgacgccctgaagagtgagcttaccgcgggcaccttc
gccaccgtactggctgccatgatggcaacgctgcagcccatcaagaacctgacccgcgtc
aatgccgagtttcagcgcggtattgccgcctgtaccacggtatttgagctgctggatact
ccttccgaggccgacaagggacgctttgaaaccgacagggtcaaaggccatgtacgtttt
gaccaggtggcgtttcgttacgaaggccaggaaaaccgtgcgctcgatggcatcagtttt
gatgtgccaccgggcaagacgttggcgctggtggggcgctcggggtcaggcaagtcgacc
attgccagcctgattaatcgcttctatggcggactcgagcagggcgccattgagctcgat
ggcgtgaatgttgaggaatatcgtctcaaaaacctgcgcagccaggtggcgctggtcagt
cagcaggtcaccctgtttaacgacaccatcgccaacaatatcgcctatgcctgcccctgg
gaagtgacccgtgagcagatagagcaagcggccacgctggcccatgccatggaatttatc
agcaaactgcccaatggcctggatacccaggtgggcgaaaacggcgtgctgctttccggt
ggtcagcgtcagcgtatcgccatcgcccgtgccatgttgcgtaatgcacctgttctcatc
ctcgatgaggctacctcggcactggataccgaatcagaaaaggccattcaggaagggctg
gagaacctgcgtcagaatcgcacctctatcgtgattgctcaccgcctgtcgaccatcgaa
agtgccgatgaaattctggtgatagagcaggggcgcattgtggagcgaggctgccacaag
tcactgttggctcaggatggtatgtacgccaaactctaccaaatgcagtttaccggctga
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