Shewanella litorisediminis: JQC75_06840
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Entry
JQC75_06840 CDS
T07182
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_06840
Transporters [BR:
slit02000
]
Other transporters
Pores ion channels [TC:
1
]
JQC75_06840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
MdcG
Motif
Other DBs
NCBI-ProteinID:
QRH03116
LinkDB
All DBs
Position
complement(1556960..1559101)
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AA seq
713 aa
AA seq
DB search
MKLSPVAIALSPLMALTAAPGFANVTDTTAHQDVAIERMIVTGSRVPERLDEVPSSVTLI
DNKTLATEMSISSELQNLLATRVPGMSPATGTSSNAGQTLRGRKALILIDGVPQSTPLRN
GSLDIRSIDMNAIERVEVIKGATSIYGNGAAGGIINYITKKPGADGALSGTLGVSSRFSA
VKFEDSVGSRFEGALNGSVGDLGYLISASRDDYGLQRDAEGDVPGLVYGLSETTTDNLFT
KFHFDFDDEKSLQLTYNYFSSAQDAHMVDVTGSVNSGEKTYAIEAGPDTLIPGEPQGVDG
NHNLMVKYEDLALFDNTRLAIDAYGQKIENVFFYSLTLANPEQGLNGGQSIIRSEKRGLR
ANFNSDFTLGDTELDLIYGVDYLQDVSSQPLVDGRIWVPEMDMQNLAFYLQAKWLFAEDW
VLKAGVRRDQMAIEVDDYQTLRLCRTATQCSTPVAVTGGEIKFDANTYNIGLRYKGSSAF
SPFISFSQGADVSDLGLLLRTATVDDLAKIQSQAALIDNYEAGFDGHWEAFSYSAAVFLN
KSELGTRTVLNPASGIYEPVRAPQEIKGIELAASYEVNDELTLGANYSWMEGKDTDQDIY
LDGQAITPPKFAAYLDWAATDNSSVSLTWLHVGDRKRFEPVNGQYTGSQGPVDSYSLLNL
AGSYRMDQLLFTLGVENLLNEDYYSARSQAFTFPGYNTKGLGTTVNLGLKWSF
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatcccctgttgccatcgcgctgtctcctttaatggccctcacggctgcaccg
ggctttgccaacgtgaccgacacaaccgctcatcaagatgtcgcaatagagcgcatgata
gtcaccggcagtcgggtgcccgagcgcctcgatgaggtcccctcctctgtaaccctgata
gacaacaagaccctcgccacagagatgagtatcagctctgagctgcagaatctgctggca
acccgcgttcccggcatgtctcccgccaccggtacctccagtaacgccggtcaaaccctg
cgtggccgcaaggcattgattttgatagatggcgtacctcagtcaacgccgctgcgaaac
ggttcgctggatattcggtccatcgacatgaatgccatcgagcgcgtggaagttatcaag
ggcgcaacctccatttatgggaatggcgcggccggcggcattatcaactacatcaccaaa
aaacctggcgccgatggcgcgctgagcggcaccctgggtgtatccagtcgcttcagtgcg
gtgaagttcgaagacagtgttggcagccggttcgaaggtgccctgaatggcagcgtgggg
gacctgggttatctcatcagcgccagccgtgatgactatggtttgcagcgggatgccgaa
ggcgacgtgccaggactggtgtacggcctgtcagaaaccacaacggacaacctctttacc
aaattccatttcgattttgacgatgaaaaatcgctgcaactgacctacaactacttcagc
tccgcccaggatgcacacatggtggacgtcaccggcagcgtcaacagcggtgagaaaacc
tatgccattgaggccggtccggacacccttatcccgggggagccccagggtgttgatggc
aaccacaatctgatggtgaagtacgaagatttagccctgtttgataacacccgcctggct
attgatgcctatggtcagaaaatagaaaacgtctttttctatagcctgaccctggccaac
ccggagcaggggctcaatggcggccagtctatcattcgctcagaaaaacgcggtcttcgc
gccaatttcaactcggatttcaccctgggggataccgagctggatttaatctatggcgtt
gattacctgcaggatgtatcaagccagcctttggtggatgggcgcatctgggtgccggag
atggacatgcagaatctcgcattctatctgcaggccaaatggctgttcgccgaagactgg
gtactcaaggccggtgtgcgccgggatcagatggccattgaagttgacgactaccaaacc
ctgcgcctgtgtcgcacagcaacccagtgctccacccccgtcgccgtaacaggcggcgag
attaagtttgatgccaacacatacaatatcgggctgaggtataagggctcatccgccttc
agcccctttatcagtttttcacagggtgcggacgtgtcggatctcggtttgttgttgcgt
actgccaccgtggacgacctggcaaaaattcaatcacaggcggcgctgattgataactac
gaagccggtttcgacggccattgggaggcgtttagctactctgcggcggttttcttaaac
aagtcagagcttggcacccgtaccgtgcttaaccccgccagtggcatctatgaacctgtg
cgagcgcctcaggaaataaaaggcattgagcttgcggccagctatgaggtcaatgatgag
ctgacccttggcgccaactacagctggatggaaggcaaggatacggaccaggatatttat
ctggatggccaggccatcaccccgcccaagtttgccgcctatctggattgggccgccaca
gacaacagcagtgtgtcgctcacctggctgcatgtgggcgatcgcaaacgcttcgagccg
gtcaacggccaatataccggcagccagggcccggtggacagctactcgctgctgaatctg
gccggcagctaccgcatggatcagctgctctttaccctcggggtcgagaacctgttgaac
gaagactattactcggcgcgctctcaggcctttaccttccccggttacaacaccaaaggc
ctgggcaccacggtgaatctgggtcttaagtggtctttctga
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