Shewanella litorisediminis: JQC75_07125
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Entry
JQC75_07125 CDS
T07182
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_07125
Transporters [BR:
slit02000
]
Other transporters
Pores ion channels [TC:
1
]
JQC75_07125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QRH03169
UniProt:
A0ABX7G739
LinkDB
All DBs
Position
1633132..1635330
Genome browser
AA seq
732 aa
AA seq
DB search
MFTKSRIPLFALAPVSLAVCSSLAFAANGNPTPASEEDPMEVMLVTADFRGLSVEKIPSS
VTVIDAQKIEDEGARHFEDILGSVANFNWSGGTSRPRYFQIRGVGEQEDYKGAPNSSVGY
LIDDIDLSGLGMVSSMYDLQQVEVLRGPQGTRYGANALAGLIYLKSKDPTEQFEHGAQLS
LGNDNLRTFAGFSSGPMMDSGELLYRVAIEQHRQDGFRDNLYLGRSDTNERDELSFRTKL
RWYANDNTQVDFTLMHADFDNGYDAWTLDNNGFNTLTDMPGTDAQRTTGVGLKVLYDGFD
KAELTSLTSFAGTDHHHGYDGDWANPEYWAARQCTDDYDVNGNGDYAELLPCEYDYTWDK
RGERSTVSQEFRLASNEAGKIWGDSTAWLVGLYGMQLKEDNDLASFYNGWPDEALRSSYD
ATNLAIFGQLDSDLGQNINLSVGLRLERRDADYSDDAGDAFDPSETMWGGHIAIGKQLNE
QHNLYGRIARGYKAGGFNMSLPAEFADKKEFDTEVLYNYEIGLKSSFLEGNFDTNLALFF
MDRQDQQVSASQQDPAKPQRFVLFTENAGSSTNYGAELDLNWYATDNLHFYGSLGYLKAE
YGDYSYQDKYGSLVDLSGRELAHAPNWTWSLGTTWRADSGFFANLNANGKSKFYYSDSND
SVSKDYAVLNARAGYEGDIWSVYVWGRNLLDEEYGVRGFYFGNEPDNGWADKQYIRFGDP
QAFGLTLDVRFL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtttactaaatcccgtattcccctgtttgcccttgcacccgtgtctttggcggtgtgt
tcgtcgctggcctttgctgccaatggcaatcccactccagccagcgaagaagaccccatg
gaagtgatgctggtgacggccgatttccggggactctcggttgaaaaaattccctccagc
gttaccgtgattgatgcccagaagatagaagacgaaggggcgcggcactttgaagacatt
ctgggctctgtggccaatttcaactggtccggtggcacctcaagaccccgttattttcag
atccgcggggtaggcgagcaggaagactataagggcgcgcccaattcctccgttggctat
ttgattgatgatatcgacctgtcggggttgggcatggtgtccagcatgtacgacctgcaa
caggtggaagttcttcgcggccctcagggaacccgctatggcgccaatgcgctggcaggt
cttatttatcttaagagcaaggatcccacagagcagtttgagcacggagcacagcttagc
ctcggcaatgacaatctcagaaccttcgccggtttcagctccggtcccatgatggactcg
ggagaacttctgtaccgtgtcgccattgagcagcaccgccaggatggctttcgtgacaac
ctgtatctcggccgctcagataccaacgagcgtgatgagctgagcttcagaaccaagctg
cgttggtatgccaacgacaatacccaggttgacttcaccctgatgcacgccgactttgat
aatggttacgatgcctggacactggataacaacggttttaataccctgaccgatatgccg
ggcaccgatgcccagcgcaccacgggtgtggggttgaaggtgctgtacgatggctttgat
aaagccgagttgacgtcgctgaccagttttgccggtactgatcatcatcacggctacgat
ggcgactgggcaaacccggaatattgggccgcacgccagtgcactgatgattacgatgtc
aacggtaatggtgattatgcagagctcctgccctgcgaatacgattacacctgggacaag
cgaggcgaacgcagcactgtgtcccaggagttccgtttggccagcaacgaggcgggcaag
atttggggtgacagcaccgcctggctcgttggcctgtatggtatgcagcttaaggaagac
aacgaccttgcttctttttacaacggttggccagatgaagcgctgcgctccagctacgac
gcgaccaaccttgccatctttggtcagctcgacagtgacctcggtcagaacataaacctg
tcggtgggactgcgccttgagcgccgggacgctgattacagcgatgatgcaggggatgcc
ttcgacccatctgaaaccatgtggggtggccatattgccattggcaaacagctcaatgag
cagcataacctctacggccgcattgcccgcggttacaaggcgggcggctttaacatgtcg
ttgcctgccgagtttgccgataagaaagagttcgataccgaggtgctctacaactacgaa
attggccttaaatccagcttcctggaaggcaacttcgacaccaatctggcgctgttcttt
atggacagacaggatcagcaagtgtctgcttcccaacaagacccggccaagccacagcgt
ttcgttctctttaccgaaaatgcgggcagctcaaccaactacggtgccgagcttgacctt
aactggtacgccaccgataacctgcatttctacggcagccttggctatctcaaggccgag
tacggcgattacagctatcaggataaatatggcagtctggttgacctctctggtcgcgag
ctcgcccacgcccccaattggacctggtcactgggcaccacctggcgcgccgactctggc
ttttttgccaacctcaatgccaatggcaagagcaagttctactattcagactccaacgac
tcagtttccaaagactatgcggtgctcaatgcccgcgcaggctacgaaggtgatatctgg
tctgtgtatgtgtggggccgcaatctgttggatgaagaatatggtgtccggggattttat
tttggcaatgagcccgataatggctgggcggataagcaatatatccgctttggcgacccc
caagcctttggcctgacactggatgtgcgcttcctgtaa
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