Shewanella litorisediminis: JQC75_08015
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Entry
JQC75_08015 CDS
T07182
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slit01002
]
JQC75_08015
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slit01011
]
JQC75_08015
Peptidases and inhibitors [BR:
slit01002
]
Cysteine peptidases
Family C82
JQC75_08015
Peptidoglycan biosynthesis and degradation proteins [BR:
slit01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
JQC75_08015
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QRH03319
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Position
1844440..1845696
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AA seq
418 aa
AA seq
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MRNFDTDSKSLEQDYLRLKNAWRQLGMHPNQGRLDEGGNTYGIAESAHHQNATQDLNSRL
IALEPNDRFLTTMNRLRHLLWLADQPWQPIVLNGLLRPGDSHTEVAAIAERLWLLGDMDT
EPQLVSPRYDDEVAQGVRAFQRRHGLKQDAVIGPKTLYWLNLSPEARAARLAKDYLLQSR
ERQALPPTYVLVNIPAFDLELVDNGEALMHSRVIVGKPSRKTPFIQSEISAVVVNPSWRV
PRRLMRLDVLPKVRKDGGYLARKGFIVWSREGEEVKETDDYFQSAAAGKFPYLLEQRPGP
DNALGRFKLHFANDDNVYLHDTPDKHLFDESMRALSSGCVRVEKINELSAWLADGRLADP
RRWQQSLQTPQTTRWFTLKERLPVHFVYWTSWVDAEGKAQFREDIYGFAQNNQILAAK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaatttcgacactgacagcaagtcgctggagcaggactatctcaggctgaaaaac
gcctggcgccagcttggtatgcacccaaatcagggacgccttgacgaggggggtaacaca
tacgggatagccgaatcggctcatcatcaaaatgcaacacaggatctcaactcaagattg
atagcccttgagcccaacgaccgatttctcactaccatgaaccggctgcggcacttgctt
tggttagccgatcagccttggcagcccatagtgctgaatggtttgctcagacccggtgat
tctcatactgaggtggcggcaattgctgagcggctatggctattgggggatatggatact
gagcctcagcttgtatccccacggtacgatgatgaagtggcacagggtgtgcgggcattt
cagcggcgtcatgggctcaagcaagatgcggttattggccccaaaacactctattggctg
aacctttcacccgaggcaagggccgcgcggcttgcaaaagactatttactgcaaagtcgt
gagcggcaagctctgccacctacctatgtgttggttaatatccccgcctttgatttggag
ctggttgataatggcgaggcgctgatgcattcccgggtgattgttggtaaacccagtcgt
aaaactccctttattcagagcgagataagtgccgttgtggtgaatccgtcctggcgggtt
ccgaggcgcctaatgcgccttgatgtgctgccaaaggtacgtaaagacggcggctatctt
gctcgtaagggctttatcgtctggagccgtgaaggtgaagaagtaaaagagacggacgac
tatttccaaagcgcggcagccggcaaattcccctatctattggagcagcgtcccggtccg
gacaatgcattggggcggtttaaattacactttgccaatgatgataatgtctatctgcac
gataccccggataagcatttgtttgatgaatcgatgcgggcattgtcttcggggtgtgtc
agggtcgaaaaaatcaacgaattgtctgcctggcttgccgatggacgcttggccgatccc
cgccgctggcagcaaagcctgcaaactccccaaaccacccgctggtttacccttaaggaa
cggctaccggttcacttcgtctactggaccagctgggtcgacgccgaaggcaaggcgcaa
ttcagagaagacatctacggatttgcgcaaaataatcaaattcttgctgccaaatag
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