Shewanella litorisediminis: JQC75_08030
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Entry
JQC75_08030 CDS
T07182
Name
(GenBank) translocation/assembly module TamB domain-containing protein
KO
K09800
translocation and assembly module TamB
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_08030
Transporters [BR:
slit02000
]
Other transporters
Pores ion channels [TC:
1
]
JQC75_08030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
UfSP_MPN_N
Motif
Other DBs
NCBI-ProteinID:
QRH03322
LinkDB
All DBs
Position
complement(1847546..1851469)
Genome browser
AA seq
1307 aa
AA seq
DB search
MSQNMTQTPPENSGIPGTPENLAKTLRWYHPWPLFKLITRLLVYIPLLVLVILALLLGTP
FGARIAVGLATSLVPNFSADYLSGSINRDLALSNINWSMDGIAVEGKELLLEWKPSCLLA
NDVCVHNLSLDGVSVLIETDKLPKGDSEPSPAHEKLVLPLTISLDKAQLTEVDVRVDTMR
FGADYLMAAASWQADGLEVNELQSRGLRVSIPAAQEADTPAQGVPQTVNNTLADSAVQPG
STQTGGTGEKHSLEPKQQHWPLANLPTIALPMNLQLQKAELTDTQLAILGEEEVISHLLL
GADFDGSALTVHELILEHPEAELELKGTVNLSADYPMALTLHATTHSPSRFPDIGEQQLQ
LDLNGSLTQLIVKAQGKGTLDFELDAEAALLNPELPFSLTLSKTNVGWPLQSPQYQAQDL
SLVSSGNLNAQTATVNGMVITPYHNPLSLASAFNHQDQAIEISEVNLSGEPGDIHLSGTL
NYADGLRWQAAVSFEKLTPSALILPESVTLPSGSLDGVFDTEGSFKEQWQISVSQTDIRG
ELEGFPLTLTGNVTVNDKLHISASDFLLSAMGAELTLNGNVEDNWDLQGDISAPDLSLLT
EGLSGELVANLDVSGTNQDPLVNLKAQGDEIQFGTTQLESLSIKGLYQPFAKHEFALSVK
GTHLNLGGRKLDTVTLGAKGDITKQRLRADSFGDIRLDTVVESQFNEKTQQVTARMTRFD
LGTEFGNWTLYEDMQLNWQLATNSGTLGETCFSQGDNALCLTKPATLGSTGDVAISFRGE
PGAIIDKLLPNNMDWKGHARLDATIDWSPKQKPSGELSLIFDPGLFTLLRPNGSLVELGF
EALSAKATLNPETLMAELSLRSSRLATLDSRIEVAVTPERTLSGYINLERIKLDALREFL
PQFDTLEGEISSELTLAGSLMAPEVSGKLALAKGAFSASANPTLVSDVDMLMAFAGQQAT
LNGSWLMGDGKGGVNGTLAWPDGQFSGELAVKGDKLAMIVPPMALLYISPDLTLTFDTTN
LDLKGGVSIPSGNIKILQLAEGGVAISPDVVFDDSIADGGQKTSPYGVTADLNIRVGDQV
KIEGMGLKGRLDGTLRLQQQAFKPPLLFGDVKVLSGSYKFMSQTLKIPKGEVQFVGPPQL
PNLNIEAIREIKDEDLVAGVRITGTGMAPAVTLFSNPSKEQAEILSYILKGKSFASNDSG
DNNALMVGAALSLGSSLSGGAMSNIGSTATSLVEKFGFSNVQLDANDDGRVAISGYIGEN
LMVKYGVGVFNPGYEMTVRYYLLSQLYLETVSGTVGQSLDIYYSFDL
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaatatgacccaaaccccacccgagaattccggtattcccggtacgcccgag
aatctggcaaagaccctgcggtggtaccacccctggccgctgttcaagctcattacccgg
ttattggtttacataccgctgcttgtgcttgtcatactggccctgttgctgggcaccccc
tttggcgcacggattgccgtggggcttgccaccagcctggtacccaatttcagcgcggat
tatttgagcggcagtattaaccgcgacctggctctgagcaatatcaattggtccatggat
ggcattgccgttgaaggcaaagaactactgctggaatggaagccgtcttgccttctcgcc
aatgacgtgtgtgtgcataacctgtccctcgatggcgtttccgtgctgatagaaacggac
aaacttcccaaaggcgacagcgagccctcgcccgcccatgaaaagctggttttaccctta
accatatccctggataaggcgcagttaaccgaagtcgatgtgcgcgtcgataccatgcga
ttcggcgccgactacctgatggcggccgcaagctggcaggcagacgggttagaggtgaat
gagttacaaagccgtggcttacgtgtgtctatccccgcagcgcaagaggcagatacgcca
gcgcaaggcgttccccaaaccgtgaataacacgcttgcggatagcgcagtgcaaccgggc
agcacacaaacgggcggcaccggggagaaacacagcttagagccaaagcagcagcactgg
ccccttgccaatttgccgaccatcgccttgccaatgaacctgcaattgcaaaaggccgaa
ctgaccgatacccaactcgctatactgggcgaagaggaagtcataagccatctgctgttg
ggagctgatttcgacggcagcgcactgactgtgcatgaactgattctggaacatcccgaa
gccgaattagagcttaaaggcacggtgaatttgtccgcagactatcccatggcgctcaca
cttcacgccaccacccactcgccctctcgtttccccgatatcggcgagcagcaattgcaa
ctcgacctcaacggcagtttgacgcagttgattgtcaaggcgcagggcaaaggtaccctg
gatttcgagcttgatgccgaggccgcgctgttaaacccagagttacccttctcgctgacc
ctgagcaagacgaatgtgggttggccattgcagtcacctcaataccaggctcaggatctc
tcattggtttccagcggcaacctgaacgcccaaaccgccacggttaacggcatggttatc
acgccatatcacaacccgctttcgctcgcctccgcctttaatcatcaggaccaagccatc
gagataagtgaagtgaacctatcgggtgaacccggagatattcatttaagcggcacactg
aattatgccgacggacttcgctggcaagccgctgtcagctttgaaaaacttaccccctca
gcccttatcttgccagagagtgtaaccttaccctccggaagtctggatggcgtctttgac
acagaaggcagctttaaagagcagtggcagatcagcgtttctcagactgatattcggggt
gaactggaaggctttccccttaccctgacaggcaacgtgacggttaacgataagctgcat
atcagtgccagcgactttttattaagcgcaatgggcgccgaactcaccctcaacggcaat
gtggaagataactgggatctgcaaggcgatatctcagcgccggacttatcgctgctcact
gaagggcttagcggcgagttggtggccaatcttgatgtcagtggcactaatcaggatccc
ctggttaaccttaaagcccagggcgatgagattcaatttggtacaacccagcttgagtca
ctgtcaataaagggcttataccaaccgttcgccaaacatgaatttgccctgtctgtaaaa
ggtactcacttaaacctcggcggccgcaaactcgacacggttaccctgggcgccaagggc
gatatcaccaaacagcgtcttcgagcagatagctttggcgatatccggctcgacacagtg
gtggaaagccagttcaacgaaaaaacgcagcaagtcacagcgcgcatgacccggtttgat
ctcggcacagaatttggtaattggaccttatacgaggatatgcagcttaactggcaatta
gctactaacagcggcaccctgggtgagacctgcttcagccagggtgacaacgccctgtgc
ctgacaaagccggccacccttggcagtactggcgatgtggccatcagtttccggggagag
cccggcgccatcatagataaactgcttccaaataacatggattggaaaggccatgcccgc
ctcgacgccaccattgattggagccccaagcaaaaaccgtccggcgagctgagcctgata
tttgatcctggactgttcacactgttacgaccaaacggcagtctggtggagttgggcttt
gaagctctgtctgcaaaagccacgctcaatcctgaaactctgatggcagaactgagcctg
cgttcctcccgacttgcaacgctggacagccgtatcgaagttgcagtcacgcctgaacgg
acgctgagcggttatatcaatcttgagcgtatcaaactcgatgccctgagagagttttta
ccccaattcgataccctggaaggcgaaataagcagcgaacttacccttgccgggagtttg
atggcgcctgaggtcagtggcaagctggcgctcgccaaaggcgcattttctgccagtgcc
aatccgacactggtaagcgatgttgacatgctgatggccttcgcaggccagcaagccaca
ctcaatggcagctggctcatgggcgatggcaagggtggcgttaacggtaccctcgcctgg
cccgatgggcagttcagcggcgagttggccgtcaaaggcgacaaactcgccatgatagtg
ccaccaatggctctactctatatatcgccagatctgacactgacctttgataccaccaac
ttggatttaaaagggggtgtcagtattccctccggcaacatcaagatactgcagttggca
gaaggcggggttgccatatcccccgatgtggtatttgatgactccatcgcagatggaggg
caaaaaaccagcccctatggcgttacggccgatctcaatatccgggtgggcgatcaggtg
aaaattgaaggcatgggccttaagggacggctcgatggaaccctgcgattacagcaacaa
gcctttaagccacctttactctttggtgacgtcaaggtgctcagtggcagctacaaattt
atgagccaaactctgaagatccccaagggggaagttcagtttgttggcccgccacagctg
cccaacctcaatatcgaagccatccgagagataaaagatgaggatttggttgccggtgtc
agaataaccggcacaggtatggcgccagcggttaccctcttctccaatccgtcgaaagag
caagcggaaatcctgtcttacatactgaaaggcaaaagctttgcaagcaatgacagtggc
gataacaacgcgctgatggtaggcgccgcactctcacttggctcatcactttccggaggt
gctatgagcaacattggcagcacggccacctctctggtagaaaaatttggcttctccaat
gtgcaacttgatgcaaatgatgacggccgggttgccatcagcggctacataggtgaaaac
ctgatggtgaagtatggcgtgggtgtgttcaacccgggctatgaaatgacagtgcgctat
tacctgctttcgcagctgtatttggaaactgtgtcgggtaccgttggccagtcgctggat
atctattacagtttcgatctctag
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