Shewanella litorisediminis: JQC75_08035
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Entry
JQC75_08035 CDS
T07182
Name
(GenBank) outer membrane protein assembly factor
KO
K07278
translocation and assembly module TamA
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_08035
Transporters [BR:
slit02000
]
Other transporters
Pores ion channels [TC:
1
]
JQC75_08035
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA_TamA_1
POTRA
TIR_2
Motif
Other DBs
NCBI-ProteinID:
QRH03616
LinkDB
All DBs
Position
complement(1851466..1853253)
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AA seq
595 aa
AA seq
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MQVNADSDPLLRINVSGVDEALEKNILAHLGSLPESQEQRRAFLFNVQDGVDDALQSVGY
YHGELSQKLSRPDKGPWELQLTVTPGEPTRIDWVDIRFAGEMLNDATFNKWLDGVNLKPG
EILNHGIYETHKAELSALALSRGYFDSKYTKAEIRVNRDENRATISLHFDSSDRYRLGDV
SFEGDTLDEGFLDKLIPFKHQSPYATKRLSALNSRLQETGYFRSTKVLPLIDKAQNGEVP
IKVELENRPNHSIELGLGADIGSSSDSTFEPRVRVTWRTPQINSHGHSQETSIEWSPDRP
KFLTTYTIPLTHPLDDQLKLRLGLLRDKYGVTQVYDPEALDFRNTGQLESSKQLLGVLRQ
QSLADGWLMGYSLDYIRESYTQFDTDYSPSFLLAGFSLSNTVRGDATLDPKWGYRHSYSV
DYADPALGSATRLTRFQAKFKWIDTFFSKHRVVARADFGLNLVNDGDLALVPPSLRYFTG
GDQSIRGYAFQEIGPYIEFTNDDGQIAREVIGGRYLAVGSLEYQYYLTPTWRLGSFVDAG
NAFDKEQFEPVVSVGGGVHWISPIGPIKLDLGVGLTETDTLERSWRIHLTMGSEL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcaacgcagacagcgatcctttactgcggataaacgtcagcggcgtggatgaa
gcgctcgaaaaaaatatccttgctcacctgggctccttgccggaatcccaggagcaaagg
cgtgcattcctgtttaatgttcaagacggtgttgacgatgcgctgcagtctgttggctac
taccatggtgaactcagccaaaaactgagtcgcccggataaaggtccctgggagctgcag
ctgacggtcactccgggtgaaccaacccggatagattgggtggacattcgctttgccggt
gaaatgctcaatgacgcgacttttaacaaatggcttgacggtgtaaacctcaagccgggt
gagattctcaatcatggtatttatgaaacccataaggccgagctgagtgcattagccctg
tcccgcggctattttgacagcaagtacaccaaagcagaaatccgggtaaaccgtgatgag
aaccgcgccaccatcagcctgcattttgattccagcgaccgttaccgcctcggtgatgtt
agctttgaaggcgataccctggatgaggggtttctagacaagctcattccctttaaacac
caaagcccctatgcaacaaagcggctttcagcactgaacagccgcttgcaggaaaccggt
tattttcgctctaccaaggttctccctctaatcgacaaagctcaaaacggggaagttccc
ataaaagttgagctggaaaaccgaccgaatcactccattgaactcggcttgggggcagac
atcggctcaagcagcgacagcacattcgagcccagagtcagggtgacctggcgcacgcca
caaatcaacagccacggccattcccaggaaaccagcatcgaatggtcccctgacaggcca
aagtttttaactacctataccatccccctcacccatccgctggacgatcagttaaaactg
aggctggggctgttgcgggataaatacggtgtaactcaggtgtatgaccctgaggcgctg
gacttcagaaacacaggtcagttggagtccagtaaacagttgctgggggtgctcagacag
cagtcacttgccgatggctggttgatggggtactcgctggattatatccgtgagagctat
acccagtttgatacagattattcgccttctttcctgctggcaggttttagcctgtccaat
acggtcaggggggatgcgactctcgaccccaagtggggttatcggcattcctacagtgtt
gattatgccgatccggccctgggctcagccacccgcctgacccgctttcaggccaaattc
aaatggatagacaccttctttagcaaacaccgtgtggttgccagggccgattttggcttg
aatctggtgaacgacggggacctggcgttggtaccgccttcactgaggtacttcaccggc
ggcgatcagagtatccgcggctacgcgtttcaggaaattgggccctatatcgagttcacc
aatgatgatggccaaatcgcccgcgaagtcatagggggccgctacctcgcagtcggcagc
cttgaatatcaatattatctgacgccgacctggcgtttgggctcctttgtggatgcaggt
aatgcgtttgataaggaacagtttgaacccgtggtatcagttggtggtggagtccactgg
atctctcccataggccccatcaagctcgacttgggtgttggcctgactgaaaccgatacg
ctggagcgctcatggcgaatccacctgaccatgggtagcgaattatga
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