Shewanella litorisediminis: JQC75_08105
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Entry
JQC75_08105 CDS
T07182
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slit03000
]
JQC75_08105
Transcription factors [BR:
slit03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JQC75_08105
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
Motif
Other DBs
NCBI-ProteinID:
QRH03334
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Position
complement(1868939..1869829)
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AA seq
296 aa
AA seq
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MQVHDVDLKLLRIFVAIVECGGLSAAESRLNIGRSTISAHLSDLEVRLGIKLCKRGRSGF
ELTESGRVTYQASLELLQHCDAFASTVASAKQELAGRASIAVIDTLVSDPRCDIAGVIAA
LKAKSSHIQFDINVCEAREVETSVVNGRSLVGIGVSRHHLRGLDYHPLHNETNYLYCGVG
HPLFDCHPDKVPALLQNAEVITSNYMRDKEMRNDDLNYQNTATAYHDEGIAHLILSGKFI
GYLPEHYASHWVDKGLFKAILPEKYSYQIPVVLITSKSIATTPLATALIDEIKRRH
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggttcatgacgtcgatttaaagctgctgaggatatttgtggccattgtggagtgc
ggcggcctgtcggcggctgagtcgcggctcaatattggccgctccaccatcagcgctcac
ctgtcggatttggaagtgcgtctgggcattaagctgtgtaagcgcggccgcagcggcttt
gagctcactgagtctggccgggtaacctatcaggcttcgttggagctgctgcagcactgc
gacgccttcgcatccacagtggccagcgccaagcaggagctggcgggccgggccagcatt
gcggtgattgataccctggtgagcgatccccgctgtgacattgccggagtgattgcggcg
ctcaaggccaagagcagccatatccagtttgatatcaacgtgtgtgaggcgcgggaggtg
gaaacctcggtggtcaacggccgctctttggtggggattggggtaagccgtcatcatttg
cgcgggctcgactatcacccgctccataacgagaccaactacttatattgcggtgtgggt
catccactgtttgattgccacccagacaaggtgcctgcactgctgcaaaacgccgaggtt
atcaccagtaactatatgcgcgacaaagagatgcgtaacgatgaccttaactatcaaaac
accgccaccgcctaccacgatgaaggcattgcccatcttattctgtcgggcaaatttatc
ggctacctgccggagcactacgccagccactgggtggacaaggggctgttcaaagccatt
ttgccggagaaatactcctaccaaatccctgtggtgcttatcacctcaaaaagcatcgcc
acgactccgctggcaacggcgctgattgatgagataaaacgccgccattaa
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