Shewanella litorisediminis: JQC75_08295
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Entry
JQC75_08295 CDS
T07182
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_08295
Transporters [BR:
slit02000
]
Other transporters
Pores ion channels [TC:
1
]
JQC75_08295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
Motif
Other DBs
NCBI-ProteinID:
QRH03367
LinkDB
All DBs
Position
complement(1906746..1909568)
Genome browser
AA seq
940 aa
AA seq
DB search
MMQFKPNLLTVALLAAGFSMQVQAAEPSEEKDVNKEEAANIEVITVKGFRTSVIKSLNEK
RFGDTVSESISADDLGALPDQSIADALTRLPGITAVRTGGQASGLNIRGLDGDFVFATLN
GREQVTTGSKRAIEFDQYPSELISQAAVYKSPKASLIEGGVAGTVELKTADPLRAAKEQN
FTFNARGAFNDRADEVADANEYGNRLSFSYQGKFLEETLGVALGYAHLYQPFVASQFIGL
RFNDAKKDVNGDGVVESISEGFEMQQKGGEDTRDGYMAAIHWRPNDNWSFKGDLFHSQFD
SENFARGFRVKSLQNGTITNANIKNGSMIGGTVSTNGTDNFALFVVNDNDSKYSELTSGS
FNIEWNNGDALTVSADISYSKADGEFVNGGSRAVLYQDIDNQIRAAESISYQLNDLNPAS
ISVTNDYTDLSTLGLKEVGMWPYNQQNDLIAYKLDFNYQLDTAFVSSVEFGVRYSEREFN
AQRSQAGYGFEFGNNPANQPVLRLTEDMTSVVNFGGELAGYPSFLAIDFDKAVDLVNAQL
AATGQDPFAPTANWSNNWTMIQSGAVNEDVLAGYVQANLEFDLADVKVTGNLGLRVVHTD
QSSTGLQQVGFGLGEAITDEKGVVSTDYIRNEVGKTYTDYLPSLNLNFHLTDNDQLRFAA
ASVMARPPIDKLKSGMGSWYDDASTPGYKKYNAWGNTSPLLDPFYADQFDLSYEHYFEDS
EGAVVVALFYKDIKSFINNFTIQPFDFEEAGFLVPDTIIDNGVEFPVVKDEGQYQTAINN
DKGGYIRGVELAYTQVFDFLPDPLSGLGFTGSYSYSDSEVQFTTDLSGSSLDIPLPGLSE
HVVNTTLFYTLDGFDTRLSMRYRSGYVSEQVAVETQLAFFDAETIFDYQASYALDNGLKF
LFQINNLTDEPNKTYFGEEYQTGTIQSFGRQYFLGLSYSM
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaatttaaaccaaacctgttaaccgtggcgctgctcgctgccggtttcagtatg
caggtacaggcggctgaaccttctgaagaaaaagatgttaacaaagaagaagctgccaat
atcgaagtgatcaccgttaagggttttcgcaccagcgtgatcaagtcgctcaacgaaaaa
cgttttggcgacacagtctctgaatccatctctgcagacgatttgggcgccctgcccgac
caatccatcgccgacgctctcacccgcttgcccggcatcactgccgtgcgtaccggcggc
caggccagcggcctgaacatccgtggcttggatggcgactttgtgtttgccaccttgaat
ggccgcgagcaggtcaccacaggcagcaagcgtgccatcgaatttgaccagtatccttcc
gagctcatcagccaggctgcggtctacaagtcacccaaggcatctttgattgaaggtggc
gtggccggtaccgttgagctgaaaaccgctgacccactgcgcgctgcaaaagagcaaaac
tttacctttaatgcccgcggtgcctttaacgatcgcgccgatgaagtcgccgatgccaat
gaatacggcaatcgcttgagcttctcttatcagggcaagttcctcgaagaaaccctgggt
gttgcgctgggttacgcgcacctgtatcagccctttgttgccagccagtttatcggcctg
cgtttcaacgatgccaagaaagatgtcaacggtgatggtgtggtcgagtccatcagcgaa
ggctttgaaatgcagcaaaaaggtggcgaagacacccgtgacggttacatggctgccatt
cattggcgccccaatgataactggtctttcaagggtgacttgttccactcacagtttgat
tctgaaaactttgcccgtggtttccgggtgaaatcactgcaaaacggcaccatcaccaac
gccaacattaaaaatggctccatgattggcggcaccgtcagcacaaacggcaccgacaac
ttcgccctgtttgtggtgaacgataacgactctaagtattcagagctgacctcaggctct
ttcaacatagagtggaacaatggcgatgccctgaccgtctcagccgacatcagctactcc
aaagccgatggcgagtttgtgaacggcggctcccgcgctgtgctgtatcaggatatcgac
aaccaaatccgcgctgccgagtccatcagctatcagctgaacgacctgaaccccgcctcc
atctcggtcaccaatgactacacagatctgagcactctgggtctgaaagaagtgggcatg
tggccctacaaccagcaaaacgatctgattgcgtacaagctggacttcaactatcagctg
gataccgcttttgtctcttctgtcgagtttggtgtgcgttactctgagcgtgaattcaac
gcccagcgctctcaggcaggttacggtttcgagtttggcaacaatccggcaaaccaaccg
gtactgcgtctgaccgaagacatgaccagcgtggtgaactttggcggcgaactcgccggt
tacccaagcttccttgctatcgacttcgacaaggccgttgatctggttaatgcgcagctc
gctgctacaggtcaggatcctttcgcccctaccgccaactggtccaataactggaccatg
atccaaagcggtgcggttaacgaagatgtgttggcgggttatgtgcaggccaacctggag
tttgatcttgccgacgtgaaagtcacaggtaacctgggtcttcgcgtagtgcataccgat
cagtccagtaccggtctgcagcaggttggctttggtctgggtgaagccatcaccgacgaa
aaaggcgtggtgagcacagactatatccgcaacgaagtgggtaagacttacaccgattac
ctgccctcgctgaacctgaacttccacctgaccgataacgatcagctgcgttttgctgcc
gcctccgtcatggcgcgtccacctatcgacaagctgaagtcaggcatgggcagctggtat
gacgatgcctccactcccggctacaagaagtacaacgcatggggcaacaccagcccactg
ctggatcctttctacgccgatcagttcgacctgtcctacgagcactacttcgaagacagc
gaaggcgccgtggtcgtagccctgttctacaaagacatcaagtctttcattaacaacttc
accatccagccattcgatttcgaagaagccggtttcctggtgcccgataccattatcgac
aacggtgttgagttcccggtagtgaaagacgaaggccaataccaaaccgccatcaacaac
gacaagggtggctacatccgcggcgttgagctggcctacacccaggtgtttgacttcctg
cccgatccattgagtggcctgggcttcaccggcagctactcttactccgacagtgaagtg
cagttcaccaccgacctgagcggctcttctctggatattccgctgcctggtttgtctgag
cacgtggttaacaccaccctgttctacaccctggatggtttcgatacccgtttgagcatg
cgttatcgcagtggttatgtgtctgagcaggttgccgttgaaacccaactggccttcttc
gatgccgaaaccatcttcgactatcaggcgtcttacgcgctggataacggtcttaagttc
ctcttccagatcaataacctgacagacgaacccaacaagacctacttcggtgaggagtat
cagacagggaccatccagtccttcggtcgccagtacttcctgggtctgagctactcaatg
taa
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