Shewanella litorisediminis: JQC75_09355
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Entry
JQC75_09355 CDS
T07182
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
slit
Shewanella litorisediminis
Pathway
slit00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JQC75_09355 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slit01007
]
JQC75_09355 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slit03016
]
JQC75_09355 (aspS)
03029 Mitochondrial biogenesis [BR:
slit03029
]
JQC75_09355 (aspS)
Enzymes [BR:
slit01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
JQC75_09355 (aspS)
Amino acid related enzymes [BR:
slit01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JQC75_09355 (aspS)
Transfer RNA biogenesis [BR:
slit03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JQC75_09355 (aspS)
Prokaryotic type
Other AARSs
JQC75_09355 (aspS)
Mitochondrial biogenesis [BR:
slit03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
JQC75_09355 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QRH00123
LinkDB
All DBs
Position
complement(2135680..2137455)
Genome browser
AA seq
591 aa
AA seq
DB search
MRSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVIFLDLRDREGLVQVVYDPDLPDVFNVA
SSLRAEFCVQVKGVVRPRPDSQVNSQMKTGEIEVLGKALTIINAADPLPLSLDNHQNSSE
EQRLKYRYLDLRRPEMAQRLMFRAKVTSFVRRFMDGNGFLDIETPILTKATPEGARDYLV
PSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF
MTSDEVMETTERMIRNLFLELMNVDLGEFPKMTWDEAMRRFGSDKPDLRNPLELVDVADL
LKAVDFAVFSGPANDEEGRVAALRIPGGAELSRKQIDDYTKFVGIYGARGLAWMKVNNLA
AGLEGIQSPVAKFLTEDIIKEVIARTGAADGDIIFFGADKANVVAESMGALRLKAGEDFK
LLQGEWRPLWVVDFPMFEKADGRFYAVHHPFTAPRGVTAAELEANPGKAVSDAYDMVLNG
VELGGGSVRIHNGDMQSTVFRILGIDDEEAKEKFGFLLEALRFGTPPHAGLAFGLDRLVM
LMTGASSIRDVMAFPKTTTAACPLTNAPGHANPDQLVELGIAVLPKEPKQD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcattattgtggagacgttaataagtctcacgtcggacaagaagtcaccctc
gttggctgggtaaaccgcagccgcgatttggggggtgtgatctttttggatcttcgcgac
cgcgaaggtttggttcaggtagtgtatgacccggacttgccagacgtattcaacgttgcc
agcagcctgcgtgccgagttctgtgttcaggtaaaaggtgtggtgcgtccacgtcctgac
agccaggtgaacagccagatgaaaaccggcgaaattgaggtgctcggtaaagcgctcacc
atcatcaacgctgccgatcctctgccactgagcctggataaccatcaaaacagcagcgaa
gagcagcgtctcaagtaccgctatctggatttgcgccgccctgaaatggcccagcgtctg
atgttccgcgccaaggtcaccagctttgtgcgtcgctttatggatggcaacggtttcctc
gatattgaaacccccatcctgaccaaggccacaccggaaggcgcccgcgactatctggtg
ccaagccgtacctataaaggtcagttcttcgctctgcctcagtcgccacagctgttcaaa
cagctgctgatgatgtcgggtttcgatcgttactatcaaatcgtgaagtgtttccgcgac
gaagacctgcgcgccgaccgtcagcctgaattcactcagattgatatcgagacctcgttc
atgacctctgatgaggtgatggaaacgaccgagcgtatgatccgtaacctgttcctcgaa
ctgatgaacgtggatctgggcgaattccccaagatgacctgggacgaagccatgcgccgc
tttggctcggacaaaccggatctgcgtaacccgctggaactggtggacgttgccgacctg
ctcaaggcggttgattttgccgtattctctggtcctgccaatgatgaagaaggccgcgtt
gctgccctgcgtattcctggcggcgccgagctgtcgcgtaagcaaatcgacgactacacc
aagtttgtgggtatctacggtgcccgcggtctggcgtggatgaaggtcaacaacctggcg
gccggcctggaaggaatacagtcgcctgtggccaagttcctgactgaagacatcatcaag
gaagtcatcgcccgtaccggcgcggccgatggcgatatcatcttcttcggtgccgacaag
gccaacgtggttgccgagtccatgggtgctctgcgtctcaaagccggtgaagacttcaaa
ctgctccagggtgagtggcgcccactgtgggtggttgacttcccgatgttcgagaaggcc
gatggccgtttctacgccgtgcaccatccattcactgcgccgcgcggtgtaactgcagcc
gagcttgaagccaacccaggcaaagccgtgtctgatgcttacgatatggtgctcaatggt
gtggaactgggcggtggttctgtacgtatccacaatggcgatatgcagtctaccgtgttc
cgtatcctcggcattgacgatgaagaagccaaagagaaatttggcttcctgctggaagca
ctgcgcttcggtacgccaccacacgcaggtctcgccttcggtctggaccgtctggtgatg
ctgatgaccggcgcaagctccatccgtgacgtgatggccttccccaagaccaccacggcg
gcctgtccgctcaccaacgcgccgggacatgccaaccccgaccaactggtggaactgggc
atcgcggtgctgccgaaagagccgaaacaagactga
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