Shewanella litorisediminis: JQC75_09370
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Entry
JQC75_09370 CDS
T07182
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slit03016
]
JQC75_09370 (cmoB)
Transfer RNA biogenesis [BR:
slit03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
JQC75_09370 (cmoB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_31
CMAS
PrmA
PCMT
Motif
Other DBs
NCBI-ProteinID:
QRH00126
LinkDB
All DBs
Position
2141321..2142313
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AA seq
330 aa
AA seq
DB search
MISFSSFYRQIADTQLQHWLESLPAILGEWQRQHKHGNLPKWEKVLAKLHYPAPEFLDLK
DSVTIGDGQQLDSGQTEKLENLLRILQPWRKGPFHVHGIHIDTEWRSDWKWDRVAPHISP
LTNRTVLDVGCGSGYHMWRMLGAGAKRVVGIDPSALFLCQFEAIKRLIDAELPVHLLPLG
IEELPPLDAFDTVFSMGVLYHRRSPIDHLLQLRDQLRMGGELVLETLVVDGDKDTVLVPQ
DRYGKMNNVWFLPSIDALKLWLEKCDFTEVRCVNVDVTSLAEQRSTPWMQNESLVDYLDP
KDINLTVEGYPAPKRATFIAVKNRSPQDAD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgatcagtttctcaagcttttatcgtcaaatcgccgatacccaattgcaacattggctc
gagtcattgcccgccattctgggtgaatggcaacgccaacataaacacggcaatctgccc
aagtgggaaaaggtgctggcaaaacttcactatccggcccctgaatttcttgacttgaaa
gacagtgtcactattggcgatgggcagcaactggacagtgggcaaaccgaaaagctcgaa
aacctgctcaggattttgcagccctggcgcaaaggccccttccatgtgcatggcattcat
atcgataccgaatggcgcagcgactggaaatgggacagggttgctccccatatcagtccg
ctgaccaatcgcacggtcctggacgtgggttgtggcagtggctaccacatgtggcgcatg
ctcggtgccggtgcaaagcgtgttgtgggtatcgatccctcggcgctgtttttatgccag
tttgaagccattaagcggctgatagacgcagaattgcctgtacacctgctgccccttggg
attgaggagctgccgcccctggatgccttcgataccgtgttctccatgggcgtgctttat
cacagacgttcacccattgatcatttgttacagcttagggatcaattgcgaatgggcggt
gaactggtgttggaaaccttggtggtagatggtgataaagacacagttctggtgccgcaa
gatagatatggcaagatgaataatgtatggtttttaccatcaattgatgcacttaaactg
tggctggaaaagtgtgacttcaccgaagtgcgctgtgtgaatgtggatgtcacttctctc
gctgagcagcgcagcaccccatggatgcaaaacgaatccctggtggactaccttgacccc
aaggacattaaccttacggttgaaggctatccggcaccaaaacgggccactttcatcgcg
gtaaaaaaccgcagtccacaggatgcagactga
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