Shewanella litorisediminis: JQC75_09440
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Entry
JQC75_09440 CDS
T07182
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
slit
Shewanella litorisediminis
Pathway
slit00730
Thiamine metabolism
slit01100
Metabolic pathways
slit01240
Biosynthesis of cofactors
Module
slit_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JQC75_09440 (thiC)
Enzymes [BR:
slit01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
JQC75_09440 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QRH03642
UniProt:
A0ABX7G8V0
LinkDB
All DBs
Position
complement(2155981..2157933)
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AA seq
650 aa
AA seq
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MDNLKPLRRPNSEKIFIEGSRPDIQVGMRQIHQTDTRIVNSRGEETFEANPPIKVYDCAG
PYSDPEAHINVRQGLPKLREGWILSRCDTEELNSASSNFTQQRLADEGLDHLRFDVLPKP
RRAKAGKRVTQLHYARQGIITPEMEYIAIRENMARDEVTDEQLNRKKPGQAFGALVGKPI
TPEFVRDEVARGRAIIPANINHPEAEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVW
STRWGADTVMDLSTGRYIHETREWIVRNSPVPIGTVPIYQALEKVNGIAENLNWEVFRDT
LIEQAEQGVDYFTIHAGVLLRYVPMTAKRVIGIVSRGGSIMAKWCLSHHQENFLYTHFRD
ICELCAAYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVKIAWEYDVQTIIEGPGHI
PMQLIKENMEKQLEHCAEAPFYTLGPQTTDIAPGYDHFTSGIGAAMIAWYGCAMLCYVTP
KEHLGLPNKEDVKQGLIAYKIAAHAADVAKGHPGAQIRDNALSKARFEFRWEDQYNLGLD
PDTARAYHDETLPQESAKVAHFCSMCGPKFCSMKITQDVRDYAASLESAASLENAASIDV
DSVQMVEVGTAESYAKAGMDKMSATFKETGSALYSEAHVDAARKAGQELV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atcgataacttaaagccgctgcgccgccccaattccgaaaagattttcattgaaggctcc
aggcctgatatccaggtgggcatgcgccaaatccatcaaaccgatacccgcatagtgaat
agccgcggcgaagaaaccttcgaggctaatccgcccatcaaggtgtatgactgcgccgga
ccttactcagatcccgaagctcacatcaatgtgcgtcaggggctgccaaagctgcgtgaa
ggctggattttatcgcgctgcgataccgaggagcttaacagcgcctcatccaattttacc
cagcagcgtctcgccgatgaggggctggatcacctgcgatttgacgtgcttccaaagccg
cgccgcgccaaagctggcaagcgggtcacccagctgcactatgcccgtcaggggatcatt
acgccggagatggaatacatcgccattcgcgaaaacatggcccgggatgaagttaccgac
gagcagcttaaccgtaaaaagccaggccaggccttcggcgccttggttggcaagcccatc
acccctgagtttgtccgtgacgaagtggcacgaggccgcgccattattccggcaaacatc
aaccacccggaagccgagccgatgattatcggccgcaactttctggtgaaggtgaacgcc
aatatcggcaactcggcggtcacctcgtccattgaggaagaagtggaaaaactggtgtgg
tctacccgttggggcgcagataccgtgatggacttgtccaccggccgatatattcacgag
acccgcgagtggatagtgcgcaactcgccggtgcccatcggcactgtgcccatctatcag
gcgctggagaaggtaaacggcatcgccgaaaatcttaactgggaagtgtttcgcgacacc
ctgattgagcaggccgagcagggggtggattacttcaccatccatgcgggcgtgctgctg
cgctacgtgcccatgaccgccaagcgggtcatcggcattgtgtcccgcggcggctccatc
atggccaagtggtgcttaagccaccatcaggaaaacttcctctacactcattttcgcgat
atttgcgagctttgcgccgcctatgatgtgtcgctgtcactcggcgatggcatgcgtccg
ggctccattgccgatgccaatgacgaagcccagtttgctgagctcgaaaccctgggtgag
cttgtgaaaatcgcctgggaatacgatgtgcagaccatcatcgaaggcccgggccatatc
cccatgcagctcattaaagaaaacatggagaagcagcttgagcattgcgccgaggcgccg
ttctataccctcggcccccaaaccaccgacattgccccgggttacgatcacttcacctcc
ggcattggcgcagccatgattgcctggtatggctgcgccatgctttgctacgttacgccg
aaagagcatttgggtcttcccaacaaggaagatgtaaaacaagggcttatcgcttacaag
attgccgcccacgcagccgatgtggccaagggccatcccggcgcgcaaatccgcgacaat
gcgctttccaaggcaagattcgagtttcgctgggaagatcagtacaacctcgggctcgat
cccgataccgcccgtgcctatcacgatgaaaccctgccgcaggagtcggccaaggtggcc
catttctgctccatgtgcggccccaagttctgctcgatgaaaataacccaggacgtgcgc
gactatgcggccagcttagagagtgcggccagcttagagaatgctgccagcatagacgtt
gacagtgtgcagatggttgaagtcggcacggcagaaagctacgccaaggcgggtatggat
aagatgtcggccaccttcaaagaaaccggcagcgcgctttacagcgaggcccacgtcgat
gctgcgcgaaaggccggccaggaactggtgtaa
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