Shewanella litorisediminis: JQC75_09720
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Entry
JQC75_09720 CDS
T07182
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
slit
Shewanella litorisediminis
Pathway
slit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JQC75_09720 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slit03400
]
JQC75_09720 (recC)
Enzymes [BR:
slit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JQC75_09720 (recC)
DNA repair and recombination proteins [BR:
slit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JQC75_09720 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QRH00190
LinkDB
All DBs
Position
2241246..2244743
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AA seq
1165 aa
AA seq
DB search
MFTLVQSNRMERLAQRLAGELNQASTNVLASEQILVQSPGMATWLRLEIAAHNGIAAALD
FPLPSNFIWSLCYALLPGVPRENAFTKDAMTWKLMALLPRLIETPHFEPLRDYLSGDSPL
KLFQLASRVADIFDQYLVYRPDWIVAWEQGENGLSPIGSPLTQGAALPDNCLWQPLLWRA
LVQYNQDELGQSHWHRANLHQALVASLTNPATDISALPKRLYVIGISSLPPQTLEVLYAL
GSRIPVTMLSLSPCRQYWGDIVDSKLRAKLALRYKADKMLPEHWEETLEVGNPLLAANGK
MGRELLDLVLSLPPEHFTLDDSGYEANDDTHLLGRLQNDILDMEVAGAPLCADLARYQSH
EGKFLLQEQDNSLVLRSCHSPLREVETLHDHLLGLLSDSQGALSAKDIVVMLPDVAAYAP
FIDAVFASRRGEHFIPYAIADRGAVQESPLIHGFLTLLDINHSRFGLSEILGLLEIPAVM
ARFKLDEEELSRLGSWLSEAGVRWGRDAQSRERLGLPAFDKHSWAFGIRRLLLGFSLGDE
GDFYQGTLPFAGVEGQQAQCIGKLLDFIEHLDEFATRFAAADSLARKFAEITYLTDTLFS
PLPEYQEELNLIRETLCDTQKALQSSASSESHLSDISLDVIRQTLGSKLTDARVGQRFLA
GSVNFCTLMPMRSIPFKVVCLLGMNEGVYPRVQHPVGFDLMAKTPARRGDRSRRLDDRYL
FLEALLSAREQLYISFIGRSERDDSERLPSMLVSELLDCCELSACVPQGSLVKRLVKQQP
LQPFDPKLYLPHQDITPSYAAQWCPQETHPPRPFIDDALDGVDEDEQTLLELASLIRFYR
DPARFFCQRRLRLDLSHRLDILDDCEPFDVDALGRYQLQHQMLNAALEADEVRQQQAMDS
LCDRLAGAGALPMAPFDKLLFGSYRRDLAPILDRCRFIMGETEGQSLKVSLELDKGRKLV
GTIDKVFAKGLLVARPGTAKAKDVLALYLRHLCLCASGYRQTSFLLDVGNFHAFLPLTPD
SALASLKDVVSHYFEAVHTPSPLIPSLAMVYVEALASGASQEESLAEISAKWDDGNGMGE
ITEPHNERLFEFPASFATSEFGALAARLWRPLLGNCYKGKLAELADFVSNPSSISPILPR
DFEDNESAANTDIDANNPKHRGEGQ
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgttcactctcgttcagtccaaccgtatggaacgtctggcacaacgcctggccggcgaa
cttaatcaggcatcgaccaatgtgctggcatccgaacagattttggtgcaaagcccgggt
atggcgacctggctcagattggaaattgctgcccacaatggcatcgccgccgccctggac
ttccccctgccatccaattttatctggtcgctctgttatgccttgctgccgggagtgccc
agggaaaacgcctttaccaaagatgccatgacctggaagttaatggctctgctgccaaga
ctgattgaaacgccccatttcgagccactgcgggactatttgagcggcgactctccgctg
aaactgtttcaactggccagccgggtcgcggacatttttgaccagtatctggtgtaccgc
cccgattggatagtggcatgggaacagggtgaaaacggcctgagcccaattggcagtccc
ctgacgcaaggcgctgccctccccgataattgcctgtggcaacccctgctttggcgtgcc
ttggtgcaatacaaccaggatgaacttgggcaaagccactggcatcgcgccaatttacat
caggcactggtggcttcgcttaccaatcctgccaccgatatcagcgccctgcccaaacgg
ctctatgtcattggtatttcgtcattaccgccccaaaccctggaagtgctttacgccctt
ggcagccgcattcctgtgactatgctcagcctgagtccctgccgtcagtactggggggac
atagtcgacagcaaactcagggccaaactggcgctgagatacaaggccgacaagatgctg
ccggagcattgggaagaaaccctcgaagtgggcaatcccctgctcgccgccaacggcaag
atggggcgcgagctgcttgatctggtgttgtcgctgccgccggagcatttcacattggac
gacagtggctacgaagccaatgatgacacccatcttttgggcaggctgcaaaacgacatt
ctggatatggaggtagcgggcgcgccactttgtgccgatcttgcccgttatcagtcccat
gagggtaagtttctgttgcaggagcaggataacagcctggttctgagaagttgtcacagc
ccgcttcgggaagtcgaaaccctgcatgatcatctccttggcctgctgtcagacagtcag
ggcgcgctgtcggccaaagacatagtggtgatgctgcccgacgttgcagcctatgcgccc
tttattgatgccgtgtttgcctcccgccgcggcgaacacttcatcccctatgccatcgcc
gaccggggtgcagtgcaggagtcaccccttatccatggttttttaaccttgctggacatc
aaccacagccgttttggtttgtcggaaatactcggactgcttgaaattccggcagtgatg
gcaagattcaagctggatgaagaagagctttcacgccttggcagctggctcagtgaagcc
ggtgtgcgttggggccgtgatgcccaaagcagggaaagacttggcttgcccgcctttgac
aagcattcctgggcctttggcattcgtcgcttactgttgggcttttccctgggcgatgag
ggggatttttatcagggcactctgccatttgccggcgttgagggccagcaggcccagtgc
ataggtaaattgctggactttattgaacatcttgatgagtttgccacccggtttgccgct
gccgacagcctggctcgcaagtttgctgaaatcacctatctcaccgacaccctgttttcg
ccactgcctgaatatcaggaagaactgaatcttatccgtgaaaccctctgtgacacccaa
aaagcactgcaatcatcggcaagcagcgaaagccatctcagtgacatatcactggacgtt
atccgccagaccctaggcagcaaactgaccgatgcccgggtcggccagcgctttttggca
ggctcagtgaacttctgtaccctgatgcccatgcgttccatcccctttaaggtcgtgtgt
ttacttggtatgaacgaaggcgtctaccccagggtgcagcaccccgtgggcttcgattta
atggctaaaacgcctgctcgccggggcgatcgttcacgacgtctcgatgacaggtatctg
ttccttgaggcactgctgtccgcaagggagcagctttacatcagctttataggccgcagc
gaacgggacgacagcgaacgcctgccctccatgctggtcagcgaactgctggactgctgt
gaactgagcgcctgtgttccccaaggcagcctggttaaacgtctggttaagcagcagcca
ctgcagcccttcgaccctaagctatacctgccccatcaggacatcaccccaagttatgcc
gcccagtggtgcccccaggaaacccacccgccgcgtccctttattgatgacgcgctggac
ggggtggatgaagatgagcaaaccctgctggagcttgcctcccttatccggttttaccgc
gaccccgcacgctttttctgccagcgccgcctcagactcgatttaagccacagactcgat
attctggacgactgcgagccctttgatgtggatgcccttggccgctaccagcttcagcat
cagatgctcaatgccgcgctggaagccgatgaagtcaggcaacagcaggccatggatagc
ctgtgtgacagacttgccggagccggggccttacccatggcaccgttcgacaagctgctt
tttggtagctaccggcgggatctggcgcccattctcgaccggtgccgctttatcatggga
gagaccgaaggacaaagcctgaaggtatctctggagctggataagggacgtaaactggtt
ggcaccatagacaaggtctttgccaaggggttgttggtggcaagacccggcactgccaag
gccaaagatgtgctggcgctgtatctgcgccacctgtgtctgtgcgcatcaggctaccgt
caaacgagttttttgttggatgtgggtaactttcatgcctttttaccccttacccccgac
agcgcgctggcaagccttaaggatgttgtcagccactacttcgaggcagtgcatacccct
tcgccactcattccatcgcttgccatggtctatgtagaggccctggccagtggtgccagc
caggaagagtcgttggcagaaatcagtgccaaatgggatgacggaaacggtatgggcgaa
atcactgaaccccacaatgagcgcctgtttgagtttccggcaagctttgccacctcagag
tttggcgccttggcagcgcgcctgtggcgaccacttcttggcaattgctacaaggggaaa
ctcgccgagcttgccgactttgtcagcaatccatcgtcgatatcacccatattgccccgc
gatttcgaagacaatgagtccgccgccaacaccgacatagatgccaataaccccaagcac
cggggagagggacaataa
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