Shewanella litorisediminis: JQC75_11020
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Entry
JQC75_11020 CDS
T07182
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slit03016
]
JQC75_11020 (truA)
Enzymes [BR:
slit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
JQC75_11020 (truA)
Transfer RNA biogenesis [BR:
slit03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JQC75_11020 (truA)
Prokaryotic type
JQC75_11020 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QRH00429
UniProt:
A0ABX7FZG9
LinkDB
All DBs
Position
complement(2520360..2521145)
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AA seq
261 aa
AA seq
DB search
MRIALGIEYDGSKFYGWQRQAEVNSVQAELERALSIVANEPIEVQCAGRTDAGVHATGQV
VHFDTNAVRKEGAWTLGVNVHLPDEIAVRWAMPVSDDFHARFSATARRYRYVIFNHNFRP
GILRKGVSHYHGDIDVQRMHDAAQALLGERDFTSFRAIGCQSNTPFRNVHKVSVSRHGMY
IVVDIQANAFLHHMVRNIVGSLLEIGLGNQPLDWMATLLDAKDRTQAAATAKPHGLYLVD
VTYPDSFGLPKLSLGPLFMPD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgctcttgggattgaatacgacggcagcaagttttatggctggcagcgtcag
gctgaggtgaactcggtacaggctgagcttgagagggcgctttccattgtggccaacgaa
cccatagaagtgcaatgtgcaggtcgcaccgacgcgggggtgcacgccaccggtcaggtg
gtgcatttcgataccaacgcagtaagaaaggaaggcgcctggacgctgggagtgaatgta
cacctgccggatgagattgcggttcgctgggccatgccggtgagtgatgatttccacgcc
cgtttttctgccaccgcccgccgttatcgttacgtgattttcaaccataatttccgcccc
ggtattttgcgcaagggcgtgagccattatcacggtgatattgatgtccagcggatgcat
gatgccgcacaggcgcttttgggcgagcgggactttaccagtttccgtgccattggctgc
cagtccaatacgccgtttcgcaacgtgcacaaggtcagcgtaagtcgccatggcatgtac
atagtggtggatattcaggccaatgccttcttacatcatatggtgcgtaatatcgtcggc
tcgctgcttgaaatcggtcttggcaatcagccgctggattggatggcgaccttgcttgat
gcaaaagaccgaacccaggccgcggctacagccaaaccccacggactttatttggtggat
gtgacctatcccgacagttttggcttacccaaactgtccctcgggccactttttatgcca
gactga
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