Shewanella litorisediminis: JQC75_11135
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Entry
JQC75_11135 CDS
T07182
Name
(GenBank) VWA domain-containing protein
KO
K07114
Ca-activated chloride channel homolog
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_11135
Transporters [BR:
slit02000
]
Other transporters
Pores ion channels [TC:
1
]
JQC75_11135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_1
TPR_2
TPR_11
TPR_7
TPR_8
TPR_16
TPR_19
TPR_12
ANAPC3
TPR_14
TPR_6
TPR_9
TPR_10
TPR_Slam
Motif
Other DBs
NCBI-ProteinID:
QRH00450
LinkDB
All DBs
Position
2551489..2553591
Genome browser
AA seq
700 aa
AA seq
DB search
MIHFIRPEWLLLFIPLMPLLWFLNRRQGAISAWQGYIAPHLARVLLTDSTSRRSGLGFWW
LGAAWSITTVALSGPAVTKEAMPVFAAGAARVLVIDMSISMYATDLPPNRLTQARFRAID
LINQLSDGDTALVAYAGDAFVISPLTRDKATLLNLLPSLSPDIMPLLGSSPASGVSLARD
LLIQGGHPDGDIVLMTDGLDMVDVADVKRALKGSPFRLAVYGFGTAQGAPMKLPNGSFVR
GNDDNLVLPKLDAELLDELAQSERGIWQPSTLDGSDIGRLVQWLSREGEATDTELTGDTW
QDLGPYLALLLLLPALLSFRRGMLASMLLPAMLTLSVISPDAGASIWQTRDQQAMEAFRQ
QDFATAANEFEREDWKAAAHYRAGNYEAALQGFEKDSSAAGLYNQGNALMQLGRYDEAAK
RYQKALQLQPDMEDAKRNAALAKALDEMQKSQQAQNSQDGQPSSDESQQQNSQSQQGDTQ
QSGSEQGQNPQQGSDKSSNDPSGDGQQQGSEGSQGSADAHSRSETAKESASNPDKDLSDQ
GAANQSGGSQSASNQSAANQTSTEQSSNDEGSDPDSKADKSSNEAPMSADVPMSQQDAPA
PTDEPAAMNGRDEEDGQSNKGNQAAQTSAQLAEGEQQEDGEQAQVGVIDPTLKESDLPPE
MLRALKSVNDDPSVLLRNKMQLEYQLRRARGEHRQEKEKW
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgatccactttattcggcccgaatggctgctgctctttattccgttgatgcccttacta
tggtttttaaaccgccgccaaggtgcaatctcagcctggcaggggtacatcgcgccccat
ctcgccagggtactgttaaccgacagcaccagccgccgctcaggcttgggtttttggtgg
ctcggcgcagcctggagcatcaccaccgtcgccctctccggccccgcagtgaccaaggaa
gccatgccggtgtttgcagccggtgcagcacgggttctggtgatcgacatgtccatttcc
atgtatgccaccgacttgccaccgaaccgactgactcaggcgaggtttcgtgccatcgac
ctgataaatcagctgagtgatggggatacggcgctggtcgcctatgccggggatgccttt
gtcataagccccctgacacgggataaggccaccttactgaacctgctgccctcactcagc
cccgacatcatgccgctactggggtcttctcctgcttctggcgtcagccttgccagagat
ttgcttattcagggcggacacccagacggtgacattgtcttgatgactgatgggctcgat
atggtcgatgtggcagatgtgaagcgggcgctgaaaggcagcccatttcgcctggccgtt
tatggctttggtacagcccagggcgcgcccatgaagctgccaaatggcagttttgtcagg
ggcaacgacgataatctggtactgcccaagctggacgccgagctcctcgacgaactggcg
caatccgagcgtggcatttggcaaccttcaaccctcgatggcagtgacatcggtcgcctg
gtgcaatggctatcccgggaaggtgaagccacagacacagagctcaccggtgacacctgg
caggatctggggccttatctcgccctgttgctgcttttacctgcgctgctgagtttccga
aggggcatgctggcgtcgatgctgttgcccgcgatgttgacgctctccgtaatcagccct
gacgccggggccagtatctggcaaacccgggatcaacaggccatggaggcgtttcggcag
caagacttcgccacagccgccaatgaattcgagcgtgaagattggaaggccgccgcccac
taccgcgccggaaattacgaagccgcgttgcaggggtttgagaaagatagcagtgctgca
ggtctctataatcagggcaatgccctgatgcagctcggccgctacgatgaagcggcgaaa
cgctatcaaaaagcacttcagctgcaacctgatatggaagatgccaagcgcaatgcggca
ttggctaaagccctcgatgagatgcaaaaatcccagcaggctcaaaacagccaggatgga
cagccctcatctgacgaatcacagcagcaaaactcacaatcgcaacaaggtgatacgcag
caatcaggttctgaacagggccagaacccgcaacagggttctgataagagcagcaatgac
ccgtcaggagacggccagcagcaaggttctgagggttcacaaggctcagcggatgcacac
agccgcagcgaaaccgctaaggagtcagcctccaatccggataaggatctgtctgaccaa
ggcgcagcaaatcaaagtggcggtagccagagcgccagtaaccagagcgctgccaatcaa
acatccacagaacagtcatcaaatgacgaaggctcagacccagacagcaaggcagataaa
agcagcaacgaagcccccatgagtgccgatgtccccatgtcgcagcaggacgcccctgcc
ccaacagatgagccagcagctatgaatggtcgcgatgaggaggacgggcaaagcaataaa
ggcaatcaagcagcccagacaagcgcacagctcgcagaaggtgaacagcaggaagatggc
gagcaagcccaggtgggggtgatagatcccacccttaaagagtcggacctgccgccggag
atgctgcgggcactaaagtcggtcaacgacgacccctcggtgctgcttcgcaacaagatg
caactggaatatcaacttcgccgcgcccgcggtgaacacagacaggaaaaagaaaagtgg
taa
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