Shewanella litorisediminis: JQC75_11725
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Entry
JQC75_11725 CDS
T07182
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
slit
Shewanella litorisediminis
Pathway
slit02020
Two-component system
slit02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JQC75_11725
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JQC75_11725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slit03021
]
JQC75_11725
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
slit02035
]
JQC75_11725
Transcription machinery [BR:
slit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JQC75_11725
Bacterial motility proteins [BR:
slit02035
]
Flagellar system
Flagellar assembly proteins
Stator
JQC75_11725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
CT_C_D
DUF3263
TY-Chap3
Motif
Other DBs
NCBI-ProteinID:
QRH00551
UniProt:
A0ABX7FZT2
LinkDB
All DBs
Position
complement(2669525..2670244)
Genome browser
AA seq
239 aa
AA seq
DB search
MNKAAAYTSMESKTSIVEQYAPLVKRIAHHMLARLPASVQLDDLLQAGMIGLLEASAKFD
GGKGAKFETFAGIRIRGAMLDEIRKGDWVPRSVHRNQRRVAQVIDELEQELGRDARDTEI
AERLDMSMEEYHHILNDVSVGKIIGIEDLGVSQDVLVPDGEQTNDIYDDLAQSQFQQALA
DAIRQLPERDALVLSLYYDEALNLKEIGAILEVSESRVCQIHSQAMLRLKGKLKHWTQV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagccgcggcgtatacctccatggagagtaaaacctccatcgttgaacagtac
gcaccgctggtaaaaagaatcgcgcaccatatgttggccagattgccggcatccgtacag
ttggacgatttgctgcaggccggcatgattggcctgcttgaggcatccgccaaatttgac
ggcggcaaaggcgccaagtttgaaacctttgccggcattcgtattcgtggtgccatgctg
gatgaaatccgcaaaggcgattgggttccacgttctgtccatcgtaatcagcgcagagtc
gcccaggtgatagatgagctggaacaggagctcggacgtgatgcccgggacacagaaatc
gccgaaagacttgatatgtcgatggaggaataccatcatatcctcaatgatgtttctgtt
ggtaaaatcatagggatagaagatttaggcgtatcgcaggatgtattggttcccgatggg
gaacaaaccaacgacatttatgatgacctggcacagagccagtttcagcaggctttggct
gatgccattcgccagttacccgagcgggacgcgctggtgttatcactttattacgatgaa
gcactgaatttaaaagaaataggcgccattcttgaggtgagtgagtcgcgggtatgccag
atccacagtcaggccatgctcaggctcaaaggtaagctcaagcactggacacaagtataa
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