Shewanella litorisediminis: JQC75_12095
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Entry
JQC75_12095 CDS
T07182
Name
(GenBank) efflux RND transporter permease subunit
Organism
slit
Shewanella litorisediminis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Motif
Other DBs
NCBI-ProteinID:
QRH00620
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Position
2740479..2743547
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AA seq
1022 aa
AA seq
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MIKAFVENGRLAALFIALLLVAGLGAMSALPRLEDPHITNRYASVITHYPGASAERVEAL
VTEVLENQLRRLEELKLIQSTSRPGISVIQLELKDDITETDPVWSRARDLMADSRAKLPE
GALNPTLDDQIGYANTVILGLAWRGGGEPRVDILGRYAKEMQSRLRLLPGTDFAHLYGAP
SEEILVELDGNKVNQLSLTPGDIAQILTAADSKIAAGEIHNSHFRALVEVSGELDSQTRI
RQVPLKVDASGQIIRLGDVARVSRQYKSPPDTLALLSGERGIMVSARMLNNTRVDKWLAQ
VRSTVSELEAGMPANIEVQWLFEQESYTVTRLGELAMNLLQGFIIILLVLMLTLGLRNAL
VVSLSLPLTALFTLACMRAVDLPIHQMSVTGLVVALGIMVDNAIVIVDAISQRRQEGQAR
LEAVGNTLKHLWLPLAGSTITTILAFAPIVLMPGAAGEFVGGIAISVMFALAGSYLISHT
LIAGLAGRFSPANEGNDWRAHGIRMPKLASAYEGLLGKVLQRPLTSALLIGLLPLLGFMA
SGRMTEQFFPPSDRDMFQIEVYLAPQVSLERSQITVAAMDKLLEQTDGIERIDWVVGGNI
PSFYYNITQRQQGAANYAQAMVKVKNFDTANALIPELQRTLDREFPEAQVLVRKLEQGPP
FNAPVELMVYGPSLEELRRIGDDIRAILASHDKVIHTRATLSPGAPKVQLAVDEDASLMS
GLTLTDIANQVQMATTGRSGGSILEQTESLPVRVRLDNSMREQQGRLAAIELVSRAGSGI
PLSALSQTHITVSRGAIPRRNGQRVNTLEAYIQTDVLPARVLGDVRERIDALPLPPGYHI
EVGGESAKRNEAVGNLLSSVALVITLLLATVVLSFNSFRLTGIILLSAAQSAGLGLLAVY
LFDYPFGFTVIIGLLGLMGLAINAAIVILAELEDVADARQMSLQTLVKTVASCTRHITST
TITTVGGFLPLIIAGGGFWPPFAVAIAGGTVLTTLLSLVWVPVMYRLLMQKRVQAQLSVQ
PV
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagcctttgtggaaaatggcaggctggcggcgctgtttattgcgctcttgctg
gttgccggtcttggcgccatgagtgccctgccccgactcgaagacccccatatcaccaac
agatatgcctctgtcattactcactatccgggcgcctctgcagagcgggtagaagccctt
gttactgaggtgctggaaaaccagttaaggcggctggaagaattaaagcttatccagtcc
acctccagaccgggcatttcggtaattcagctggagctgaaggacgatatcaccgaaacc
gaccccgtctggtcccgggccagagacttaatggccgacagccgggctaagttgcccgaa
ggagcacttaaccccacccttgacgatcagattggctacgccaataccgttattctgggt
cttgcgtggcgcggtggtggcgagcccagagtcgatattctcgggcggtacgccaaagag
atgcagagtcgcctgcgactgttgcccggtaccgactttgcccacctctatggtgccccc
agcgaagaaatactggtggagctcgatggcaacaaggtcaatcaactctcgttaaccccc
ggtgacatagcgcaaatactcaccgcagccgacagtaaaatcgccgcgggtgaaatccac
aacagccacttccgcgccctggtcgaggtatcgggggagctggactcccaaacccgcatc
cgccaggttcccctcaaggtggacgcctcaggtcagataatccgcctgggtgacgttgcc
cgcgtcagtcgccaatacaagtctccgcccgataccctggcactcctgtccggcgagcgc
ggcatcatggtcagcgcccgcatgctcaataacacccgggtagacaagtggctcgcccag
gttcgcagcacagtatccgagctcgaagccggtatgcccgccaatatcgaggtacagtgg
ctgtttgagcaggagagctacacagtcacccgcttgggtgagctggcaatgaacctgctg
cagggctttatcatcatcctgctggtgttgatgcttaccctggggcttcgcaatgcactg
gtcgtctcactgtcattgccccttaccgcgctttttaccctggcatgcatgcgcgcggtg
gatttacccattcatcagatgtcagtcacgggcctggtggtggcgctggggatcatggtg
gataacgccattgtgatagtggatgccatttcccaaagaaggcaggaagggcaggcacgg
ctcgaagcggtcggcaataccttaaagcacctgtggctgcctttggccggttctaccatt
accaccatactcgcctttgctcccatcgtgctgatgccgggcgcagcgggcgaatttgtg
ggtggcattgccatatccgtgatgtttgccctcgccggttcctaccttatctctcatacc
ctgattgccggattggccgggcgtttcagtcccgcaaacgaaggcaacgactggcgcgcc
catggcattcgcatgccaaagctagccagtgcttacgaagggctgctcggcaaagtcctg
caacgccccctgaccagcgcactgctgataggcctgttgcccctgttgggctttatggca
tcaggtcgcatgacagagcaattcttcccgccttctgacagggatatgttccagattgaa
gtgtatcttgccccccaggtgagcctggagcgcagccaaatcacagtggcggccatggac
aaactgctggagcaaaccgatggcatagagcgcatcgattgggtggtcggcggcaacatc
ccctctttttattacaatatcacccagcgccagcagggggcggccaactatgcccaggcc
atggtgaaagtgaagaatttcgataccgccaatgccctcatccccgagctgcaacgcacc
ctcgacagagagtttcccgaagcgcaggtgctggttcgaaaactggagcaggggccgcca
tttaacgcacccgtggagctgatggtgtacggcccgtcgctggaggaactcagacgcatc
ggcgatgacatccgggccattctcgcctcacacgacaaggtgatccatacccgcgccacc
ctgagcccgggcgcacccaaggtacagctggcggtggacgaggatgcgtcgctcatgagc
gggctgacgctcaccgatatcgccaatcaggtgcaaatggccaccacaggcagaagcggc
ggcagcatactggaacagacagagtcgctgccggtgcgggtacgtctcgataacagcatg
cgcgagcagcaagggcgccttgccgccatagagctggtgtcccgcgcgggcagcggcatc
cccctgtcggcactgtctcaaacgcacatcacagtcagccgcggcgccattccacggcgt
aacggccagcgggtcaatacccttgaggcctacattcaaaccgatgtgttgcctgccagg
gtcctgggcgacgtccgtgagcgcattgatgccctgcccttgccgccgggatatcacatt
gaagtgggcggcgagagcgccaagcgaaatgaggctgtgggcaatctgttgtcatcggtg
gccctggtcatcaccttgttgctggccactgtggtactcagtttcaactccttccgcctg
accggcatcatactgctcagcgcagcgcagtcggcaggacttgggctgcttgcggtgtac
ctgtttgattatcctttcggctttacggtgatcatcggcttgctggggttaatggggctt
gccattaacgccgccatcgtgattttggccgagcttgaggatgtggccgatgccagacag
atgtcattgcaaaccctggtgaaaaccgtggccagctgcacccgccacatcacatcgacg
accataaccacggtagggggatttttaccgctgattattgccggagggggattttggcca
ccttttgcggtggccattgccggtggaaccgtgctgacgaccctgttgtcgttggtgtgg
gtacctgtaatgtatcgcctgctgatgcaaaaacgcgtgcaggctcaactctcggttcag
ccggtgtga
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