Shewanella litorisediminis: JQC75_12185
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Entry
JQC75_12185 CDS
T07182
Symbol
bamB
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_12185 (bamB)
Transporters [BR:
slit02000
]
Other transporters
Pores ion channels [TC:
1
]
JQC75_12185 (bamB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
DUF6906
DUF7713
Motif
Other DBs
NCBI-ProteinID:
QRH00636
UniProt:
A0ABX7G040
LinkDB
All DBs
Position
complement(2772443..2773630)
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AA seq
395 aa
AA seq
DB search
MKSWCKNLLAAGLSLAVLSACSSNDVDEEPVSELKELNATVFPEINWSASVGSGVGDYYS
RLRPAVEYGKIFAAERNGLVVAFDETSGEKLWEVDFSDLFKDRLLGKNKGARLASGVTAA
RGKVFVGGESGLLAALDAETGAVVWSVQASGELLSAPTVGDNIVVVNASSGSLDAFDVDT
GEKRWSYENTLPNLTLRGTGSAAFLAGGFFVGTADGKVSVVVKDNGQPAWEQPIYTPKGG
NEFSRMADVDMTPLPVGDNLYAVSYNGNLVSMEMRSGRVLWTRKYSSFNELAASGVQLYL
VADSSRIYALDRRNGLELWSNSELANRELTSPVVFDNYLVVGDFEGYLHFIDRNDGSIVG
RIEVDSDGLYSQPLVVDGKIYVQGRSGKLARIALP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcttggtgcaagaatttgctggcggccggcctgagtttggccgtgctgtcagcc
tgctcctccaatgacgtggacgaagagcccgtcagcgaactcaaggagcttaacgcgacc
gttttccctgaaatcaactggagtgccagtgtgggaagcggtgtaggcgattattactca
cgcctgcgtccagcagtggaatacggcaagatatttgccgccgagcgtaacggtttggtc
gtggcattcgatgaaaccagtggcgaaaagctgtgggaagtcgatttcagtgatttgttc
aaagacagattgcttggcaaaaacaaaggtgcgcgcctcgcttccggtgttacagcggct
cgtggcaaggtgtttgtgggtggtgagagtggccttttggcggctcttgatgccgaaacc
ggtgcggttgtctggagtgttcaggcctctggagaattgctgtctgcccccactgtcggt
gataacatcgtagtggtgaacgccagttctggttcactggatgcctttgatgtagatacc
ggcgagaaacgctggagctacgaaaataccctgcccaacctgacgctgcgcggcacaggt
tctgcggcctttctggccggcggtttctttgtaggcacagccgatggcaaggtgtccgtg
gtggtgaaagacaacggtcagccagcatgggagcagccaatttacaccccgaaaggtggc
aatgagttcagccgcatggcggatgtggacatgacgccgctgcccgtgggtgacaacctg
tatgcggtgagctacaacggtaatctggtgtccatggaaatgcgctccggtcgcgtgctc
tggacccgtaaatattccagcttcaacgagctggccgcaagcggtgtgcagctgtatctg
gttgccgacagcagccgcatttatgcccttgaccgtcgcaacggtctggagctgtggagc
aattcagagctggccaaccgtgaactgacctcacccgtggtgtttgataactacctggta
gtgggtgattttgaaggttatctgcactttattgaccgcaacgatggcagcatcgtcggt
cgcatcgaagtcgacagcgacggcctttacagccagccgctggtcgtcgatggtaagata
tacgtgcagggccgcagcggcaaactggcccgtatcgcacttccttaa
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