Shewanella litorisediminis: JQC75_12630
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Entry
JQC75_12630 CDS
T07182
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
slit
Shewanella litorisediminis
Pathway
slit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JQC75_12630 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slit03400
]
JQC75_12630 (xseB)
Enzymes [BR:
slit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JQC75_12630 (xseB)
DNA repair and recombination proteins [BR:
slit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JQC75_12630 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
QRH00722
LinkDB
All DBs
Position
2887301..2887540
Genome browser
AA seq
79 aa
AA seq
DB search
MAKKPENLSFEASLAELERIVTELEQGDVSLDDALKQFERGIGLVRASQAKLEQAQQKVA
ILLTQAPDAPLDDFLPEGE
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaaaaaccggaaaatttgagttttgaagcgtctttggcagagctggaacgcata
gtcactgaattggaacagggcgacgtctcattggacgatgcgttgaaacaattcgagcgg
ggtattggactggtaagagccagtcaggccaaactggagcaggcccaacaaaaagtggcc
atcttgctgacccaggccccggatgccccactcgacgactttttacccgagggagaataa
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