Shewanella litorisediminis: JQC75_12790
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Entry
JQC75_12790 CDS
T07182
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_12790
Transporters [BR:
slit02000
]
Other transporters
Pores ion channels [TC:
1
]
JQC75_12790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
Nm-ACP
Motif
Other DBs
NCBI-ProteinID:
QRH00752
UniProt:
A0ABX7G0B8
LinkDB
All DBs
Position
complement(2931535..2932098)
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AA seq
187 aa
AA seq
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MNPWLCVGVLVGLISLPLHAISDKDGDGVPDFKDACPGTPAGSRVGANGCIIPVSAPAPV
CLMTSQMNPYPSSCHQGEILSIYFDFGSAFVPFEAAAKLAWLAKSIESDTVSLLLQGHTD
DIGSEAANYRLSAERADNVAASLAMDFAIPKARITTASFGESMPVAPNNTEIGRQQNRRV
DILILVE
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaacccttggctttgcgttggtgtgctggttggactgataagtttgccgctgcatgcg
ataagcgacaaagatggagatggagtacctgatttcaaggatgcctgtcccggtacgccg
gcgggcagcagagtgggggccaacgggtgtattattccggtcagtgcgcctgctcctgtg
tgtctgatgacgtcacagatgaatccatacccatccagttgtcaccaaggcgaaatcctg
tcgatctattttgattttggatcggccttcgtgccttttgaagctgccgccaagctggcg
tggttggcaaagagtatcgagtcagacactgtctcgttgctgcttcaggggcacacagac
gacataggttcagaagcggccaattatcgcttgtcagccgaacgcgctgacaatgttgca
gctagcctcgccatggattttgctatccctaaagcgagaataacgacagcatcctttggg
gagtcaatgcctgttgcccccaataacaccgagataggccgacagcaaaaccgccgtgtc
gatattttgatactcgttgaatag
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