Shewanella litorisediminis: JQC75_12985
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Entry
JQC75_12985 CDS
T07182
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
slit
Shewanella litorisediminis
Pathway
slit00220
Arginine biosynthesis
slit00240
Pyrimidine metabolism
slit00250
Alanine, aspartate and glutamate metabolism
slit01100
Metabolic pathways
slit01110
Biosynthesis of secondary metabolites
slit01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JQC75_12985 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JQC75_12985 (carB)
00220 Arginine biosynthesis
JQC75_12985 (carB)
Enzymes [BR:
slit01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
JQC75_12985 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
RimK
CoA_binding_2
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
QRH00788
LinkDB
All DBs
Position
complement(2967252..2970482)
Genome browser
AA seq
1076 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRNIIKKERPDAILPTMGGQTALNCALELEAKGVLKEFNVEMIGATA
DAIDKAEDRARFDKAMKKIGLECPRAGIAHSMEEAYAVLDQVGFPCIIRPSFTMGGSGGG
IAYNKEEFEEICSQGLELSPTNELLIDESLIGWKEYEMEVVRDRNDNCIIVCSIENFDAM
GVHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGISPTTGRMVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELMNDITGGRTPASFEPSIDYVVTKVP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESVQKALRGLEVSRNGFDPVVDLNDADA
LQKIRHELKEPGADRIWYIGDAFRAGLSVDDIFTLTNIDRWFLVQIEEIIQLEAKVKELG
VTGIDEDFLRKLKRKGFSDARMSALLGISEGEIRKLRERFNVFPVYKRVDTCAAEFATDT
AYMYSTYEEECEANPSDKDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGFETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVHYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQQAIKRLNMKQPENDTVTTVEGAVIAAERIGYPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNASPVLLDRFLDDATEVDIDAVCDGETVVIGAIMEH
IEQAGVHSGDSACSLPPYTLSKAIQDQMREQVTKLAFELGVVGLMNVQFAVKDNEIYMIE
VNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKAQNFTKEVIPPFYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGDTFAEAYAKSELGSIKDVPRSGRALLSVRNSDKKKVADLA
ARLIELGYELDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNGEYSYIVNTTEGRQ
AIEDSRQLRRAALRYKVNYTTTLNAAFANCMAHNADDRNKVASVQELHERVKQSQG
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtaccgacataaaaagtattcttatcctgggtgctggccccatcgttatc
ggccaggcctgtgaattcgactactctggcgcccaggcctgtaaagccctgcgcgaagaa
ggctaccgtgtcatcctggtgaactccaacccggccaccatcatgaccgacccagagatg
gccgatgccacttacatcgagcctatccactgggaagtggtgcgcaacatcatcaagaaa
gagcgtccggatgcgattctgcccaccatgggcggccagacagcactgaactgtgccctg
gagctggaagccaaaggcgttctgaaggaattcaacgttgagatgatcggcgccaccgcc
gatgccatcgacaaggccgaagaccgcgcccgtttcgacaaggccatgaagaagattggc
ctggagtgtccacgcgccggtatcgcccacagcatggaagaggcctacgcggtactcgac
caggtgggtttcccctgtatcatccgtccctccttcaccatgggtggctcgggcggcggt
atcgcctacaacaaggaagagttcgaagaaatctgttctcagggtctcgaactgtcacct
accaacgagcttttgattgacgaatcgctcatcggttggaaagagtacgagatggaagtg
gtccgtgaccgcaacgataactgcatcatcgtctgctccatcgaaaacttcgacgccatg
ggcgtgcacacaggtgactccatcactgtggcccctgcccagacccttaccgacaaggaa
taccaaatcatgcgtaacgcctccatggcggtactgcgtgaaatcggtgtggaaaccggc
ggctcaaacgtacagtttggtatcagcccgacaaccggccgtatggtcgttatcgagatg
aacccccgtgtgtcccgctcttcagcgctggcctctaaagcaaccggtttcccgattgcc
aaggttgccgccaagctggccgtgggtttcaccctcgatgagctgatgaacgacatcacc
ggcggtcgcactcctgcgtctttcgagccgtccatcgactacgtggtcaccaaggtgcca
cgctttaacttcgaaaaatttgccggcgccaacgaccgtctgaccactcagatgaaatcc
gtgggtgaagtgatggccattggccgtaccttccaggagtctgtgcaaaaggccctgcgt
ggcctcgaagtaagtcgcaacggtttcgaccctgtcgtcgacctgaacgatgccgatgca
ctgcagaaaatccgccatgagctcaaagagcctggcgcagaccgtatctggtacataggc
gatgccttccgtgccggcctgtctgtggacgatatcttcaccctgaccaacatcgaccgc
tggttcctggtacagattgaagaaatcatccagctggaagccaaggttaaagagctgggc
gtaaccggtatcgatgaagacttcctgcgtaagctaaagcgcaagggcttctccgatgct
cgcatgagtgcactgcttggcatcagcgaaggcgaaatccgcaagctgcgtgagcgcttc
aacgtattccccgtgtacaagcgcgtggatacctgcgccgccgaatttgccaccgacaca
gcctacatgtactccacctatgaggaagagtgcgaagccaatccgtctgacaaagacaag
atcatggtgctcggcggtggtccaaaccgtatcggtcagggtatcgagttcgattactgc
tgtgtgcacgccgcgctggcgctgcgtgaagacggctttgaaaccatcatggttaactgt
aaccctgaaaccgtttctaccgactacgacacctcagaccgtctgtacttcgaaccagtc
accctggaagacgtactggaaatcgtccgcatcgagaagccaaagggcgttatcgtgcac
tacggtggccagacgccactgaagctggcccgtgccctggaagccgccggtgtgcctatt
atcggtaccagccctgatgccatcgaccgtgccgaagaccgtgagcgcttccagcaggcc
atcaagcgcctgaacatgaagcagcctgagaacgacactgtaaccacagtggaaggtgcc
gtgatcgccgccgagcgtatcggatacccactggtggttcgcccatcctacgtgctgggt
ggccgcgccatggaaatcgtctatgacgagcaggacctgcgccgctacttcaacgaagcc
gtgagcgtatccaacgcctcgccagtactgctggaccgcttcctggatgatgccaccgag
gtggatatcgatgccgtgtgcgatggcgaaaccgtggttatcggtgccatcatggagcac
atcgaacaagccggtgttcactctggtgactcagcctgttcgctgccgccatacacactg
tccaaggcgattcaggaccagatgcgcgagcaggtaaccaagctggcgtttgagcttggc
gtagtgggtctgatgaacgtgcagttcgcggtaaaggataacgaaatctatatgattgaa
gttaacccacgtgctgcccgtaccgtgccattcgtatccaaggccaccggtgtgccactg
gccaagatcgccgcccgtgtgatggcaggtcagagcctgaaagcgcagaactttaccaag
gaagttatcccgcctttctactcagtgaaagaagtggtactgcctttcaacaagttcccc
ggcgttgacccgctgctcggccctgaaatgcgctctaccggtgaggtaatgggggtgggt
gataccttcgccgaagcctatgccaagtctgaactgggctctatcaaggacgtaccacgc
tcaggccgcgccctcttgtctgtgcgtaacagcgacaagaaaaaggttgccgacctggct
gcccgtctgattgaactgggttatgagctggatgccacccacggcaccgcggttatcctc
ggtgaagccggtatcaacccacgtctggtgaacaaggtgcacgaaggccgtccacacatt
cttgaccgtatcaagaacggtgagtacagctacatagtgaacaccaccgaaggccgtcaa
gccatcgaagattcacgccagctgcgtcgcgctgcgctgcgttacaaggtgaactacacc
accaccctgaacgccgccttcgccaactgtatggctcacaacgccgatgaccgcaataaa
gtggcctcggtacaagagctgcacgagcgcgtaaagcagtctcagggctga
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