Shewanella litorisediminis: JQC75_13550
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Entry
JQC75_13550 CDS
T07182
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
slit03110
]
JQC75_13550 (clpB)
Chaperones and folding catalysts [BR:
slit03110
]
Heat shock proteins
HSP100
JQC75_13550 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_24
TniB
AAA_14
nSTAND3
bpMoxR
ATPase_2
AAA_7
NBD_SMAX1
IstB_IS21
AAA_18
DUF815
NACHT
AAA_25
AAA_19
ATP_bind_1
Fib_alpha
DNA_pol3_delta2
AAA_6
Motif
Other DBs
NCBI-ProteinID:
QRH00884
LinkDB
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Position
complement(3077781..3080354)
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AA seq
857 aa
AA seq
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MRLDRMTNKFQIAISDAQSLALGRDHQFIEPVHLMMALLNQDGGSIHPLLTQSGMRVSNL
RSLLSQELERQPQVEGTGGDVQLSQALIRLLNLCDKLSQKRKDKYISSELFVLAALEGND
TLAQILKQAGATKERLEQTIEDIRAGQKVDDPNAEDNRQALKKYTVDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSL
DMGALVAGAKYRGEFEERLKAVLNELAQEEGQVILFIDELHTMVGAGKSDGAMDAGNMLK
PALARGELHCVGATTLDEYRQYVEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELH
HHVEITDPAIVAAASMSHRYVSDRKLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRAI
QLKLEEQALAKENDEASRKRLEHLRHELKEVEARANELNEIWRTEKAALAGTQHIKADLE
QARLDLEVARRASDLTRMSELQYGRIPELEKQLDLAAQAEMQDMKLLRNKVTDVEIAEVL
SKATGIPVAKMLEGEREKLLQMEHALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGS
FLFLGPTGVGKTELCKSLAKFLFDTESSLVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDIIQERFGTLDYAQMKQEVMNVVVHSFRPEFLNRIDETVVFHPLDAEHIKNIASIQIE
SLRKRLAEREFELELSDEALAFIARAGFDPVYGARPLKRALQQEVENPLAQKLLRGEFIP
GKPIRVDCQDAELVFAQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgatcgtatgaccaacaaattccagattgccatatctgatgcccagtctctg
gcccttggtcgagaccatcaatttatcgaacctgttcatctgatgatggcgctgctcaat
caggacggcggctcaattcatcctttactaacccagtccggtatgcgggtgagcaatttg
cgctcactcttgtcgcaggagctcgagcgtcagccccaggtagaaggcaccggcggtgat
gtacaactgtctcaggcgctgattcgattgcttaacctgtgtgacaagctgtcgcaaaag
cgtaaagacaagtacatctccagcgagctgtttgtgctcgccgcccttgaaggcaacgac
accctggcgcaaatcctcaaacaggcgggtgccaccaaagagcggctggagcaaaccatt
gaggatatccgcgccggccagaaggtggatgaccccaatgccgaagacaatcgtcaggcg
ctgaaaaagtacacggttgacctgactgagcgtgccgagcagggcaagcttgaccccgtg
ataggtcgcgacgatgaaattcgccgcaccattcaggtattgcagcgccgcagtaaaaat
aaccccgtgctcatcggtgagcccggcgtgggtaaaaccgccatcgtggaagggcttgcc
cagcggattgttaatggcgaggtgcccgaaggcattaaaaacaagcgggtgctgtcgctg
gatatgggggcgctggtggccggcgccaaataccgtggtgagtttgaagagcgtttaaaa
gctgtgctcaatgagctcgctcaggaagagggccaggtgatcctctttatcgatgagctg
cacaccatggtgggtgcaggtaagagcgatggtgccatggacgccggtaacatgctcaaa
cccgcgcttgcccgaggtgagctgcactgcgtcggcgccacgaccctggatgaataccgc
cagtacgtggaaaaagatgccgcccttgaacgccgtttccaaaaagtgctggtggatgag
ccctcagtggaagacaccattgctattttgcgtggtctcaaggagcgctacgagctgcac
catcacgtggaaattactgatccggccattgtggcggcagcgagcatgtcgcaccgctat
gtgtcagaccgtaagttgccggacaaggctatcgacctcatcgacgaggccgcatccagc
atccggatgcagattgactccaagccggaatccctcgaccgcctcgagcgccgtgccatt
cagcttaagctggaagagcaggcgctggccaaagaaaacgatgaggccagtcgcaagcgt
cttgaacatttgcgccatgagctcaaagaagtggaagccagggccaatgagctcaatgag
atttggcgcaccgaaaaggcggcgctcgcgggtacccaacatattaaagccgatctcgaa
caggcacggttggatttggaggttgcccgcagggcgagcgatctgacccgcatgtctgag
ttgcaatatggccgtattcccgagcttgaaaaacagctcgatttggcggcgcaggccgaa
atgcaggatatgaagctacttcgcaacaaggtcaccgatgtggaaatagccgaggtgctg
tccaaggcaaccggtattcctgtggccaagatgctggaaggcgaacgcgagaaactgctg
caaatggagcatgcactccatgaacgggtgattggtcagaacgaggcggtggatgccgtg
gccaatgctattcgcagaagccgcgccggacttgccgaccccaaccgtccgatcggctct
ttcctgttcctcggccccaccggggtaggtaaaacagagctgtgtaaatcactggccaag
tttttgttcgataccgagtcgtcgctggtgcgcatcgacatgtcggaatttatggagaag
cattcagtgtcccgcttggtgggggcgcctcccggatacgtgggttacgaagaaggcggt
tatcttaccgaggcggtgcgccgcaaaccgtattcggtcattctgctcgatgaggtggaa
aaagcgcatcccgatgtgttcaatattctcttgcaggtgctggatgatggtcgcctgacc
gacggtcagggccgcactgtggattttcgcaataccgtggtgatcatgacctcgaacctc
ggctccgatattattcaggagcgcttcggtaccctggattatgcccagatgaagcaagaa
gtgatgaatgtggtggtgcacagtttcaggccggagtttttaaaccggattgatgagacg
gttgtgtttcacccgctggatgcagagcacatcaagaacattgcctccattcaaatcgag
tctctgcgcaagcgtttggccgagcgtgagtttgaactcgagctcagtgatgaggcgctg
gcatttattgccagagccggatttgaccctgtctatggtgcgcggccactgaagcgggcg
ctgcagcaagaggtggaaaacccgctggcgcagaaactgctgcggggtgagtttatcccc
ggcaagcccattcgggtcgactgccaggatgcagagctggtgtttgcacagtaa
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