Shewanella litorisediminis: JQC75_14405
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Entry
JQC75_14405 CDS
T07182
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slit03009
]
JQC75_14405
Enzymes [BR:
slit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
JQC75_14405
Ribosome biogenesis [BR:
slit03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JQC75_14405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QRH01042
LinkDB
All DBs
Position
complement(3275300..3276031)
Genome browser
AA seq
243 aa
AA seq
DB search
MISPRGRLDSFLAKTLNIPKKAVRELLKAERVTVDGELALEMAQQIGPFSQIYLGDTALR
AETPRYLMLHKPVGVVSATKDKEHKTVLDLIPDALRTGLHIVGRLDLNTSGLVLLSNDSR
WSESMMQPGAHVPKEYRVTLANVLTEDYVAAFERGFYFETEGITTLPARLTILGEREARV
ELCEGKYHQIKRMFGRFQNPVVALHRHRIGALRLDPALAPGQWRPLSDDEKLACLQGAES
PND
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgatttccccccgtggcaggctcgacagctttttggccaaaaccctcaatattcccaaa
aaagcagtgcgcgaactgctcaaagccgagcgggtgactgtggatggcgagcttgcgctg
gagatggcgcagcaaattggccccttcagccagatttatttaggcgataccgcccttcgc
gccgaaacgccgcgctacctgatgctgcataaacccgtgggggtggtgtcggccaccaaa
gacaaagagcataaaaccgtgctcgaccttatccctgatgcgctcagaacaggcttacac
atagtcggcaggctggatttgaatacctcggggctggtgcttctgtccaacgacagccgc
tggtccgagtccatgatgcagcccggcgcccatgtgcccaaggaatatcgggtgactctg
gcaaatgtgctcacagaagattacgtcgccgcttttgagcgcggcttttactttgagacc
gaaggcatcaccacactgcctgccaggcttaccatcctcggtgagcgcgaggccagggta
gagctttgcgaaggcaagtaccatcaaatcaagcgcatgtttggccgttttcaaaacccg
gttgttgcactgcatcgacaccgcatcggcgccctgaggctggacccggcgcttgctccc
gggcagtggcggccactctccgacgatgaaaagctggcctgtctgcaaggcgccgagtcg
ccaaacgactga
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