Shewanella litorisediminis: JQC75_15115
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Entry
JQC75_15115 CDS
T07182
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slit03009
]
JQC75_15115
Enzymes [BR:
slit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
JQC75_15115
Ribosome biogenesis [BR:
slit03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JQC75_15115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QRH01174
LinkDB
All DBs
Position
3422507..3423259
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AA seq
250 aa
AA seq
DB search
MSDSDLTKGTRLCKYLAEAGVASRRGASRLIEAGRVCIDGQPAAHSDRVFGSSQVTLDGE
PLYPAQAKTYFLYHKPVGIDCRLRPDDPYSLIHHLPADLRLFPAGRLDKDSRGLLLLTND
GELTQRLMHPDFHHEKGYLITLNKAPKPGDIAAIAAGLDYGEGPTRPCRIAVATDNSHST
EDSSTHRVRMWLTQGKKRQIRRLWRARGYLVVDLLRESIQSLTLGELGEGQIRALNETER
LTLLAALGQK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgacagcgacttaaccaaaggcacccgcctgtgtaaatatctggccgaggccggt
gtcgcctcacggcgcggcgcatcgcgtttgatagaggccggccgagtgtgtattgatggc
cagcccgccgcccacagcgacagggtgtttggctcaagccaagtgaccctggatggcgag
cccctgtatccagctcaggccaagacgtacttcctttaccacaaacccgttggcatcgac
tgccgcctgcgcccggacgatccatacagccttattcatcatttacccgccgatttacgg
ctattccccgccggacggctggacaaagactcccgcggcctcttgctgctgaccaatgat
ggcgagctgacacagcgcctgatgcacccggactttcaccatgaaaaaggctatctcatc
actctgaataaagcgccaaagcccggggacattgcggccattgcggcgggtttggattac
ggtgagggccctacccgcccctgccggattgcagtcgccaccgataacagccattcgacg
gaagacagcagtacgcacagggtaagaatgtggctgacccagggtaagaagcgccaaatc
cgccggctgtggcgggcacggggctaccttgtggtggatttgttgagggagtcgattcaa
agcctgacgctgggcgagcttggtgaaggccagatacgagcgctcaacgagacagagcgc
ctcacactcctggcagcgctgggccagaaatga
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