KEGG   Shewanella litorisediminis: JQC75_16305
Entry
JQC75_16305       CDS       T07182                                 
Name
(GenBank) response regulator transcription factor
  KO
K13041  two-component system, LuxR family, response regulator TtrR
Organism
slit  Shewanella litorisediminis
Pathway
slit02020  Two-component system
Brite
KEGG Orthology (KO) [BR:slit00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JQC75_16305
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:slit02022]
    JQC75_16305
Two-component system [BR:slit02022]
 LuxR family
  TtrS-TtrR (tetrathionate respiration)
   JQC75_16305
SSDB
Motif
Pfam: Response_reg GerE Sigma70_r4_2 TadZ_N Sigma70_r4 HTH_23 GlutR_dimer HTH_24 HTH_40 FleQ
Other DBs
NCBI-ProteinID: QRH01390
LinkDB
Position
3685729..3686304
AA seq 191 aa
MRLYLVDDDEAIRDSLTYMLDQCGRQLTSFASAEAFLAQADITQPGCLILDSRMPGLSGE
ALQHELVNQQSPLGIIFLTGHGDLPMALAAFREGACDFFQKPVQAAPLCDAIDKAEAESQ
RRYEVAGLRLKLARLSEREAQVLRLLTDGLTNKQISETLYLSLRTIEVHRASMMKKLGVH
NLAELGRFACR
NT seq 576 nt   +upstreamnt  +downstreamnt
atgcgcctgtatctggtggacgatgatgaagccattcgggattcactgacctacatgctg
gatcagtgcggtcggcagctaaccagctttgccagcgccgaagcctttctggcacaagca
gacataacccagcccggctgccttattctggacagccgtatgcccggtctcagcggtgaa
gcgctgcaacatgaactggtgaatcagcaaagtccccttgggattatctttcttaccgga
cacggcgacctgcccatggcactggccgcgtttcgcgaaggcgcctgcgatttctttcaa
aaaccggttcaggccgcacctttgtgtgatgccatcgacaaggctgaggccgaaagccag
cgacgctacgaggtagcagggctcaggttgaaacttgcccggctcagtgagcgggaagcc
caggtactgcggctgctaaccgatggacttaccaacaagcaaatttcagaaaccctttac
ctgtcgctcagaaccattgaagtacacagagccagcatgatgaaaaagcttggggtacac
aatctggcagagctggggcgttttgcctgccgctga

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