Shewanella litorisediminis: JQC75_16315
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Entry
JQC75_16315 CDS
T07182
Name
(GenBank) efflux RND transporter permease subunit
KO
K15726
heavy metal efflux system protein
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_16315
Transporters [BR:
slit02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JQC75_16315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
QRH01392
LinkDB
All DBs
Position
complement(3687659..3690859)
Genome browser
AA seq
1066 aa
AA seq
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MLQKLIEQAVRSRLIVLIFLIAAMAAAAVMLPRLNLDAFPDVTNVQVQVNTAAEGLAAEE
VEKLISYPVESAMYALPSVTEVRSLSRTGLSIVTVVFEEGTDIYFARQQVFEQLQAARET
IPDGVGVPEIGPNTSGLGQVYQYILRAAPESGIAPDELRSLNDYLVKLIMMPVGGVTDVL
SFGGEVRQYQVQVDPAKLLSYGIKLDDVTTALEGNNRNAGGWFMAQGQEQLVVRGYGLLP
AGDAGLDAIAQIPLAEWLGTPVRIMDVARVAFGSEIRVGAVTMTRRDEAGSPEPLGEVVA
GVILKRMGANTKATIDDINSRTALIQQALPDGVTFEVFYDQSDLVTKAVTTVRDALLLAF
VFIVAVLALFLVNVRATALVLLSIPVAIALALMVMSYFGMSANLMSLGGLAVAIGMLVDG
SVVMVENIFRHLTQPDGRIDDGQPTDPGLSEEDAHREGGYGGIAMRILQAAREVCSPIFF
ATLIIIVVFAPLFALEGVEGKLFQPMAVSIILAMLSALMVALVVVPALAVYLFRHGVHLR
QSPLLIPIDKGYRRVLGAVMARPKTLGITALLLFGLSMALLPRLGTEFVPELEEGTINLR
VTLAPTASLDTSLMVAPKLEAMLLEFPEVEYALSRIGAPELGGDPEPVSNIEIYIGLKPI
DEWQSAGSRVELQRLMEEKLSVFPGLLFTFSQPIATRVDELLSGVKAQLAIKLFGPDLDV
LAEKGQQLSDLVSKVPGAVDVSLEQVSGEAQLVVRPDRARLARYGISVDEVMNLVSTGIG
GSAAGQVIDGNARYDINVRLKADTRASADAIADLLLVGANGARVRLGEVADVVVEMAPPN
IRRDDVQRRVVVQANVSGRDMGSVVKDIYALVPEAKLPPGYTVSVGGQYENQQRAQAKLM
LVVPVSIGLIALLLYFSFGALKQVGLIMANVPLALIGGVVALYVSGTYLSVPSSIGFITL
FGVAVLNGVVLVDSINQRRAGGEALYQAVYEGTAARLRPVLMTALTSALGLIPILLSSGV
GSEIQQPLAVVIIGGLFSSTALTLLVLPTLYMALYRRDEREIEEPE
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgctacagaaactcatagagcaggcggtgcgaagccgtctgatagtgctcatctttttg
atagccgccatggcagctgctgccgtgatgctgccgaggttgaatctggatgcctttccc
gatgtgaccaacgtgcaggtgcaggtgaataccgccgccgaggggctcgccgccgaagag
gtggaaaagctcatcagctacccggtggaatcggccatgtatgccctgccttcggtgacc
gaagtgcgctctttgtcgcgcaccgggctttccattgtgaccgtggtgtttgaagaaggc
accgacatctactttgcccgccagcaggtgtttgagcagctgcaggcagcaagggagact
attccggacggtgtgggcgtgccggagattggccccaacacctcgggccttgggcaggtg
taccagtacattctgcgggctgcgcccgagtcgggcatagcccctgacgagcttcgcagc
ctcaacgactatctggtgaagctcattatgatgccggtgggtggcgtgaccgatgtgctc
tcgttcggtggtgaggtacgccagtatcaggtacaggtcgacccggccaagctgctctct
tatggcatcaaactggacgatgtgaccacagcgctggaaggcaataaccgtaacgccggt
ggctggtttatggcccagggccaggagcaattggtggtgcgcggctatggcctcttgcct
gccggtgacgccgggcttgatgccattgcgcaaataccccttgcagaatggctgggcacg
ccggtgcggattatggatgtggccagggttgcctttggcagtgaaatccgcgtcggtgcc
gtgaccatgacccgccgtgacgaagccggtagccctgagccactgggtgaagtggtggcc
ggggtgattttgaagcgcatgggcgccaacaccaaggcgaccatagatgacatcaacagc
cgtaccgccctgattcagcaggcgttgccggatggggtgaccttcgaggtgttctacgac
cagtctgatctggtgaccaaggcggtgaccacggtgcgcgacgccctgttgctggccttc
gtgtttattgtggctgtgctggcgctgtttttggtgaatgtgcgcgccaccgcgctggtg
ctcttgtcgattccggttgccatcgcgctggcgctgatggtgatgtcttatttcggcatg
tcggccaatctgatgtccctcggcggccttgccgtggccataggtatgttggtggatggc
tctgtggtgatggtggagaatattttccgccacctcacccagcctgacggtcggattgat
gatggccagccgaccgacccgggcctcagtgaagaagacgcccaccgtgaaggcggctat
ggcggtattgccatgcggattttgcaggcggcgcgggaagtgtgcagcccgattttcttc
gcgaccctcatcatcatcgtggtgtttgcgccgctctttgccctcgaaggagtggaaggc
aagctgttccagccgatggcggtcagcatcattctggcgatgctgtcggcactgatggtg
gcgctggtggtggtgcctgcgctggcggtgtatctgtttcgccacggcgtgcatctgcgc
caaagcccgctgcttatccccatcgataaaggctaccgccgggtgctgggcgccgtaatg
gcgcgccccaaaaccctgggtatcacagcactgctgctgtttggactcagcatggcgctg
ctgccacggcttggcaccgagtttgtgcccgagcttgaggaaggcaccatcaacctgcgg
gtaaccctggcacccaccgcaagcctggatacctcgctgatggtagcgcccaagcttgaa
gccatgctgctggaatttcccgaggtggaatatgccctgtcgcgtatcggtgccccagag
cttggcggcgaccctgagcctgtgagcaacatcgaaatctatatcggcctaaagcccatc
gatgagtggcagtcggcaggcagtcgcgtcgagctgcagcggctgatggaagaaaaactg
tcggtgttcccgggcttgctgtttaccttctctcagcccattgccacccgggtggatgag
ctcttatccggcgtaaaagcccagcttgccatcaagctgtttggcccggatttggacgtg
cttgccgaaaaaggtcagcagctttcggatctggtgtcaaaagtgcccggcgccgtggat
gtgtcgcttgagcaggtgagcggtgaagctcagctggtggtgcgcccggaccgtgcccgt
ctggcgcgctacggcatcagcgtggatgaggtgatgaaccttgtcagcaccggcattggt
ggcagcgccgccgggcaggtgattgacggcaacgcccgctacgacatcaatgtgcgcctt
aaggccgacacccgcgccagcgccgatgccatagcggatctcttgctggttggcgccaac
ggcgcccgggtacgcctgggtgaggtggccgatgtggtggtggaaatggcgccgcccaac
attcgccgcgacgatgtgcagcgccgggtggtggtgcaggccaacgtctccggccgcgat
atgggctcggtggtgaaagacatctacgccctggtgcccgaggccaagctgccgccgggc
tataccgtgagtgttggcggtcagtacgaaaaccagcagcgggctcaggcgaagctgatg
ctggtggtgcctgtgtccatcggtttgatagcgctcttgctgtacttctccttcggcgcg
ctcaagcaagtggggctcatcatggccaatgtgcctttggcgctgattggcggtgtggtg
gcgctctatgtcagcggcacctatctgtcggtgcccagctccatcggttttatcaccctg
tttggcgtggccgtgctcaatggcgtggtactggtggactccatcaaccagcgccgtgca
ggtggtgaagccctgtaccaggcggtgtacgaaggcacggcggcgcgtctgcgcccggtg
ctgatgacggcactgacctcggcgctggggctgattccgattttgctctcaagcggtgtg
ggcagcgaaattcaacagccgctggcggtggtgattatcggcggcctgttcagctcgaca
gccctcacgctgctggtgttgccgaccctgtacatggcgctttaccggcgcgatgagcgt
gagattgaagagcctgaatga
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