Shewanella litorisediminis: JQC75_16690
Help
Entry
JQC75_16690 CDS
T07182
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
slit
Shewanella litorisediminis
Pathway
slit00300
Lysine biosynthesis
slit00470
D-Amino acid metabolism
slit01100
Metabolic pathways
slit01110
Biosynthesis of secondary metabolites
slit01120
Microbial metabolism in diverse environments
slit01230
Biosynthesis of amino acids
Module
slit_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JQC75_16690 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JQC75_16690 (lysA)
Enzymes [BR:
slit01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JQC75_16690 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
QRH01464
LinkDB
All DBs
Position
complement(3763870..3765114)
Genome browser
AA seq
414 aa
AA seq
DB search
MDHFLYRDERLFAEDCDVASLAAEHGTPLYVYSRATLERHWHAFDGAVATHPHLICYAVK
ANSNLAVLNVLARLGSGFDIVSGGELSRVIEAGGDPAKVVFSGVGKTVAEMELALKTGIL
CFNLESGAELELLNEVAGRVGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIPMEEAEA
LFARAAALPNLEVKGVDCHIGSQLTELKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL
GVTYNGETPPHPDVYAAAILEKLNGRPLKLIFEPGRAIAANAGIFVTQVLYTKDNGDKRF
VIVDGAMNDLIRPSLYGAWQNIIPAVKTNQPTTRCDVVGPVCETGDFLGKDRELAAGSGD
LLVVRSAGAYGFTMASNYNTRPRAAELMVDGDKAYVVREREKLSQLWQGEQLLP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttggatcattttctctaccgtgacgagcggctgtttgccgaagactgcgatgtggcaagc
cttgccgctgaacatggcacacccctgtatgtttattcccgtgctaccctcgagcgccac
tggcatgccttcgatggcgctgtagcgacgcatcctcacctgatttgctatgcggtcaaa
gccaactccaacctggcagtactcaatgtgctggcccgtcttggcagtggctttgatatc
gtctccggtggtgaactcagccgcgttatcgaagcaggtggcgatccggccaaggtggtg
ttttccggcgtgggcaaaaccgtggccgaaatggaactggcgctcaaaaccggcattctg
tgttttaacctggagtcgggcgctgagcttgagctcctgaatgaggtcgccggccgcgtc
ggcaaggtggcgcccgtgtcactgcgggtcaatcccgatgtggatgcagggactcatcct
tatatttccaccggcctgaaagaaaacaagtttggtattcccatggaggaggctgaggcc
ctgtttgcgcgcgctgccgccctgccgaatctggaagtcaaaggcgtggattgccacatt
ggctcacagctgaccgaacttaagcccttcctcgatgccatggatcgcatgctggccctg
attgaccgcctggcagagcagggcatagtgattgaacactttgacgtggggggcggcctg
ggtgtgacctacaacggcgaaaccccaccgcatccggatgtgtatgccgctgctatcctc
gaaaaactcaatggtcgtccgctgaagctgatttttgagccgggccgtgccattgccgcc
aacgcaggtatctttgtcacccaggtgctgtacaccaaggataatggtgataagcgcttt
gtgattgtggatggcgccatgaatgaccttatccgtccgtccctctatggcgcctggcag
aacatcattcccgctgttaaaaccaatcagccaactacccgctgtgacgtggtcggcccc
gtgtgtgaaaccggtgatttcctcggtaaagaccgtgaactggccgcaggcagtggcgat
cttctggtggtgcgcagcgccggtgcttacggctttaccatggcctccaactacaatacc
cgcccccgtgcggccgagctgatggtggatggtgacaaggcatatgtggtacgtgagcgg
gaaaaactcagtcagctctggcaaggagagcaactcctgccgtaa
DBGET
integrated database retrieval system