Shewanella litorisediminis: JQC75_17815
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Entry
JQC75_17815 CDS
T07182
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slit03021
]
JQC75_17815 (rpoH)
Transcription machinery [BR:
slit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JQC75_17815 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
2Fe-2S_thioredx
HTH_19
HTH_DeoR
UCR_14kD
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QRH01676
LinkDB
All DBs
Position
complement(4016495..4017352)
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AA seq
285 aa
AA seq
DB search
MTGQTQSMALMVPQGASSLEAYIHSVNSMPMLEAEQEYQLAKRLQETGDLQAAKQLIMSH
LRFVVHVAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNLRKAKQRLGWFSDDEVAMVAENLGVSKEDVTEMESRMAA
QDQAFDLVNDHDDDEGFAPVHYLEDHSSDLAANIENDNWESNAQNRLISAIKTLDERSQH
ILRARWLDDDKVTLQELAEQYQVSAERIRQLEKNAMNKLKARMEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgactggacaaacgcaatcaatggcactgatggtcccccagggagccagtagccttgaa
gcttatattcactcggtcaacagcatgcccatgctggaggcggagcaggagtatcagctc
gccaagcgtttgcaggaaaccggtgacctgcaggcagcaaagcagctgattatgtcccac
ttgcgctttgtggttcatgtggccaagagctactcaggctatggcctgccacaggcagac
ctgatccaggaaggcaatattggcctgatgaaggccgttaaacgcttcgatcccgatgtg
ggtgtgcgtttggtgtcttttgccgtgcactggatcaaggcagaaattcacgaatatgtg
ctgaaaaactggcgcattgtcaaagtggccaccaccaaggcccagcgcaagctgttcttc
aatctgcgtaaagccaagcagcgtttgggctggttctcagacgacgaagtggccatggtg
gcagaaaacctgggtgtgtccaaagaagatgtgaccgaaatggagtcgcgtatggcggct
caggatcaagccttcgatttggtaaacgatcacgacgacgatgaaggcttcgccccggtg
cactatctggaagatcactcttccgatttggctgccaatattgaaaacgacaactgggaa
tccaatgcccagaaccgtttgatttccgccatcaagaccctcgatgagcgcagccagcat
attctgcgtgcccgctggctggatgacgacaaggtcaccctgcaggagttggccgagcaa
tatcaggtgtcggccgagcgtattcgtcagcttgaaaagaacgccatgaacaagctcaag
gcgcgtatggaagcctga
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