Shewanella litorisediminis: JQC75_17880
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Entry
JQC75_17880 CDS
T07182
Name
(GenBank) ribonuclease T
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slit03016
]
JQC75_17880
Enzymes [BR:
slit01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
JQC75_17880
Transfer RNA biogenesis [BR:
slit03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
JQC75_17880
Prokaryotic type
JQC75_17880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-ProteinID:
QRH01688
LinkDB
All DBs
Position
4029554..4030525
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AA seq
323 aa
AA seq
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MTFFLRLLPLFIGVYSLPVFADTFVAKQSCPLYQSKNKLTNPNEVMTVPGQAYPVLELLG
NPKRPDWVRVTTAALVSPERWVAAKCGDLERHLVEEVPSRCDIAGEQDSHVLALSWQGAF
CELFGKGKPECTALDKTPASTRWLSLTLHGLWPNKSACGTDYGFCGEVKRKAKGFCSYPD
IALSKNAQSKLAEVMPSADFGSCLEKHQWWKHGSCQQMNADKYFIEAARLTSLINESRMV
KLLADSSGKMQSTATLRQAFTDEFGHQSAKRISFHCSRGLLTEIRLSLPATLDASLGLNH
LLARQAPELRDNCPASFLVDTPG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgacgttttttctgcgcctgctgccactgtttatcggtgtttactccctgccagttttt
gccgatacctttgtggccaagcagagctgccccctgtatcaatccaagaataaactgacc
aatcccaatgaggtgatgactgtccccggacaggcgtatccggtgctggaactgctgggg
aatcccaaacgaccagactgggtgcgggtcaccactgccgcactggtttctccagagcgt
tgggtggccgcgaagtgcggcgacctggagcgtcatttagtcgaagaagtccccagtcgc
tgcgacattgccggggagcaggacagtcatgtcctggcgctgagttggcaaggcgccttc
tgtgaactctttggcaaaggaaagcccgagtgcacagctctggacaaaacacccgcatca
acgcgatggctatcgttgacactccacggcctctggccaaacaaaagcgcctgcggcacc
gactatgggttctgcggcgaggttaagcgtaaggccaaaggtttttgcagttaccctgac
atagcgctcagcaagaacgcacagagcaagctggctgaggtgatgccatcggccgatttt
ggctcctgccttgaaaagcatcagtggtggaagcacggcagctgtcagcaaatgaacgcc
gataagtattttattgaagcagcccggcttaccagcttgatcaatgagagccgcatggtg
aagctactggcagacagcagcggaaaaatgcagtcaacggcaacgcttcgtcaggcattt
accgatgaatttggtcatcagagcgcaaagcggatcagcttccattgcagcaggggcctg
ctgacagagattcgcctcagcctgccagcaaccctggacgcgtccttgggtctgaaccat
ctgttggcacgccaggcacctgaattgagagacaactgtccggcaagttttctggttgat
acgcccggttaa
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integrated database retrieval system
