Shewanella litorisediminis: JQC75_18360
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Entry
JQC75_18360 CDS
T07182
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slit03009
]
JQC75_18360
Ribosome biogenesis [BR:
slit03009
]
Prokaryotic type
ribosomal protein modification factors
JQC75_18360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QRH01779
UniProt:
A0ABX7G383
LinkDB
All DBs
Position
4127103..4129286
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AA seq
727 aa
AA seq
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MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCV
SRDIPTEGIRLSQNNIVDPENRYNQQFKIQVELPESISEKDREGILRSIDRCTVKKVVQT
GPEFVIETVENLDEDAQAMLMVTPDADHSTFILGKDLPLEQTIANMTAKLAELGMKIEIS
SWRNLVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLSCNFFYNDQYFGEE
IANAEFVHYPNEKWFPLEDDDSLPAGLLDEYCLDIYDNDGELCGSHLVDTNSGNYERGIC
AIPYTRHSDGETVYFPSNLIENLFLSNGMSAGNNLAEAKVQCLSEIFERAVKRQIIEEEI
ALPDVPKEVLAKYPSIVAGIEALEAQGFPVVVKDASLGGQFPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDVQKPTFNSMAVQEPENFVEHFIDSTGVISWRF
FSAKHDYEFVEWDFSGTNEEESAALFGILEDLGLEAYIAEFTALGSACRILVPGYSEVYP
VTDLIWDNTNKALDFREDILNLHRLSDDELTDLVERLEESELDNYTDIITLIGIEFDENT
VWGQLTILELKLLCYLALGELEAAQELTETFLQYNDNTVKRGLFYQAMSAVLEISLDDEL
ELEDYRHNLTRMFGEETMEAVIGSVEGSVRFYGLTPTSMKLEGLDRHQRLIESYKKLHAA
RAKLAGL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaattttctcgataacctgagacttgaagccaagttcgacgacttc
accgtggttgccgaccaacctattcgctacaagggcgatggctctgcgccaagccccttc
gactactttctagcttcttccgccctgtgcgccgcctattttgtgaaggtgtactgcgtg
tcgcgggatattcccaccgaaggtatccgcctgtcgcagaacaacattgttgacccggaa
aaccgctataaccagcagttcaaaattcaggtcgaactgccggaaagcatcagtgaaaaa
gaccgcgaaggcattctgcgctccatcgaccgctgcaccgtgaaaaaagtcgtccagacc
ggccccgagttcgttatcgaaactgttgagaatctcgacgaagacgcccaggccatgctg
atggtgacgccggatgccgatcacagcacctttattctgggtaaagatctgccgctggag
cagaccatcgccaacatgaccgccaaactggcggagctggggatgaaaatcgagatctcc
agctggcgcaacctggtgcccaacgtctggtcgctgcatatccgcgatgccgcctcgccc
atgtgttttaccaacggcaaaggcgccaccaaagaaagtgccctgtgctcggcgctgggt
gagtttatcgagcggctaagctgcaacttcttctataacgatcagtattttggcgaagaa
attgccaatgcagagttcgtccattatcccaatgaaaagtggttcccgctggaagatgac
gactcgctgcccgcaggcctcttggatgagtattgcctagatatttacgacaacgatggc
gagctttgcggttcacatctggtggacaccaactcgggcaactatgagcgcggtatctgc
gccattccatacactcgccacagcgatggcgagactgtgtatttcccgtccaacctgatt
gaaaacctgttcctcagcaacggcatgagcgcaggcaataacctggccgaagccaaggtg
cagtgtctgtcggaaatttttgagcgcgcggtaaagcgccagatcattgaagaagaaatt
gccctgccggacgtacccaaagaggtgctggccaagtacccatccatcgtagcgggtatc
gaagcgctggaggcccagggcttcccggtggtggtgaaagacgcctccctcggcggccag
ttccctgtgatgtgcgtgaccttgatgaacccacgcacaggtggcgtgtttgcctctttt
ggtgcccatcctagcctggaagtggcgctggagcgcagtcttaccgaactgctgcaaggc
cgcagcttcgagggcctgaacgatgtgcaaaagccgaccttcaacagcatggcggtacag
gagccggagaacttcgttgagcactttatcgactccaccggggtgatctcctggcgcttc
ttcagtgccaaacacgactatgagtttgtggagtgggatttctccggcaccaatgaagaa
gaatccgccgccctgttcggcatcctcgaagacctggggcttgaggcctatatcgccgag
tttaccgcccttggcagcgcctgccgtattctggtgcccggctactccgaggtgtatccg
gtgaccgacctgatttgggacaacaccaataaggcattggatttccgtgaagatatcctc
aatctgcatcgcctcagcgacgatgagctgactgatttggttgaacgcctcgaagagagt
gagctggataactacaccgacatcatcaccctgattggtatcgagttcgatgaaaatacc
gtttggggccagctgactatccttgagcttaagctgctgtgctacctggcgctgggcgag
ctggaagcggcgcaggaactgaccgaaaccttcctgcaatacaacgacaatacagtaaaa
cgcggcctcttctatcaggccatgtcagcggtgctggaaatcagcctggacgacgagctg
gaactggaggactaccgccacaacctcacccgcatgttcggcgaagagaccatggaggcg
gtcatcggctcggtggaaggttcggtgcgtttctacggccttaccccaaccagcatgaaa
ctggaagggctggaccgccatcagcgactgattgaaagctacaagaagctgcacgccgcc
cgcgccaaactggcggggttgtaa
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