Shewanella litorisediminis: JQC75_18370
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Entry
JQC75_18370 CDS
T07182
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
slit
Shewanella litorisediminis
Pathway
slit00061
Fatty acid biosynthesis
slit00071
Fatty acid degradation
slit01100
Metabolic pathways
slit01212
Fatty acid metabolism
slit02024
Quorum sensing
slit04146
Peroxisome
Module
slit_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JQC75_18370
00071 Fatty acid degradation
JQC75_18370
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JQC75_18370
09145 Cellular community - prokaryotes
02024 Quorum sensing
JQC75_18370
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
slit01004
]
JQC75_18370
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slit04147
]
JQC75_18370
Enzymes [BR:
slit01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JQC75_18370
Lipid biosynthesis proteins [BR:
slit01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JQC75_18370
Exosome [BR:
slit04147
]
Exosomal proteins
Exosomal proteins of breast milk
JQC75_18370
Exosomal proteins of breast cancer cells
JQC75_18370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QRH01781
LinkDB
All DBs
Position
complement(4129911..4131704)
Genome browser
AA seq
597 aa
AA seq
DB search
MSLEQFHLVRLLKARTQQNPDAIALKGFEMAAPWDAVSRKAFDHSSDSLAMQLIAGGLAV
QAKVGIMSNNCPQWTVADVAVLKARAVVVPIYPTSTREQAAFILNDAEASWLFVDNAERY
GLACELRAFCPQIKTIVVFDDAVALTHADDVHLSQLLMAAPDGEAARELGARFEQANLDD
LLTLIYTSGTTGDPKGVMLPHRAIASTIRQHDKRLAFTEGDVSLAFLPLSHVFERGWSFY
VLGRGGCNVYLSDTNRVKEAIAAVRPHTLCVVPRFLEKVYSAVQDKLSRAPASRKALFAW
AMSVGGRRFEVAQGRAKGGLLLSLQARLADKLVGSKIRDVLGGRLKFMPCGGAALNADVG
AFFNAVNVPVLCGYGLTETTATVTCNTLDNRVPGSNGQCLPEVEIRIGENDEILVRGDTV
MTGYYKRPDDTASAFEDGWFKTGDAGRLDEAGNLFITDRIKELMKTSNGKYIAPQRVEGV
VGRCPFIEQVAVIADARNYVTALIVPAYEALEAWAREKGLKYESPLELIRHSHVLEHFEA
RLKLMQEGLAGFEQIKKFTLLPDAFTMESGLITPTLKLRRKVIYHKYQREISAMYGS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcgagcaatttcatctggtcaggctgctcaaggccaggactcaacaaaatccc
gatgccatcgccctgaaagggttcgaaatggcagccccctgggatgctgtcagccgcaag
gccttcgaccacagcagcgatagtctggcgatgcaattgattgccggtggcttggcagtg
caggccaaggtcggcattatgtcgaacaactgtccacagtggacggttgccgatgtcgct
gtgcttaaggcccgcgccgtagtagtgcccatctatcccaccagtacccgggaacaagcc
gcttttatactcaacgacgccgaagccagttggttgtttgtggataatgccgagcgctat
gggcttgcctgtgagctgcgcgctttttgcccacagataaaaaccatagtggtgttcgat
gacgctgtggcgctgacccatgccgatgatgttcacctgagccagctgctgatggcggcg
cccgatggtgaggcggccagggagctgggagctcgcttcgagcaagccaatctggacgac
ttgctgacactcatctacacctcgggtaccacaggggatcccaagggcgtgatgttgccc
cacagagccattgcctccaccattcgccagcatgacaaacgcctggcctttaccgaaggc
gatgtgtcgctggcctttctgcccctgagtcacgtatttgaacgtggctggagcttttac
gtgcttggtcgtggcggctgcaatgtgtacctgagtgacaccaacagagtgaaagaggcc
atcgctgctgtgcgtcctcacaccctgtgtgtggtgccccgtttcctcgaaaaagtctac
agcgctgtgcaggacaagttgtcccgggcgccggcatcccgcaaggcgctgtttgcctgg
gccatgtcagtgggtggacgccgctttgaagtggctcagggccgcgccaaaggtggcttg
ttgttatccctgcaggccagactggccgacaaactggtgggcagtaagatccgtgatgtg
ctgggtggcaggctcaagtttatgccctgtggcggcgcagcactgaatgccgatgtgggc
gcttttttcaacgcggtaaatgtgcccgtgctctgtggttatggtctcaccgaaaccacg
gccaccgtcacctgcaataccctggataaccgggtgccaggatccaacggtcagtgtttg
cccgaggtggaaatccgcatcggtgaaaacgatgaaattctggtccgtggcgataccgtg
atgaccggctattacaagcgccccgacgatacagccagcgcctttgaagatggctggttt
aaaaccggtgatgcggggcgactggatgaggccggtaacctgtttattaccgatcgcatc
aaggagctgatgaagaccagtaacggtaaatacattgcgccgcagcgggtggaaggcgtt
gtaggccgttgcccctttatcgagcaggtggcggtgattgccgatgcccgcaactatgtg
accgcgctgattgtgcccgcctatgaggcgctggaagcctgggccagggagaaagggctc
aagtacgaatcgccacttgagcttatccgccacagccacgtgttggagcactttgaagct
cggcttaagttgatgcaggaaggccttgcaggctttgagcaaatcaagaagtttaccctg
ctgcccgatgccttcaccatggaatcggggcttatcacacctaccctgaaactcaggcgc
aaggtgatttatcacaagtatcagcgtgaaatcagcgccatgtacggcagctga
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