Spodoptera litura (tobacco cutworm): 111347814
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Entry
111347814 CDS
T08157
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03030
DNA replication
sliu03420
Nucleotide excision repair
sliu03430
Mismatch repair
sliu03440
Homologous recombination
sliu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111347814
03420 Nucleotide excision repair
111347814
03430 Mismatch repair
111347814
03440 Homologous recombination
111347814
03460 Fanconi anemia pathway
111347814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sliu03000
]
111347814
03032 DNA replication proteins [BR:
sliu03032
]
111347814
03400 DNA repair and recombination proteins [BR:
sliu03400
]
111347814
Transcription factors [BR:
sliu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111347814
DNA replication proteins [BR:
sliu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111347814
DNA repair and recombination proteins [BR:
sliu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111347814
MMR (mismatch excision repair)
111347814
DSBR (double strand breaks repair)
HR (homologous recombination)
111347814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF8448
PAS_8
Ribosomal_60s
IBR
Circo_capsid
Motif
Other DBs
NCBI-GeneID:
111347814
NCBI-ProteinID:
XP_022813945
UniProt:
A0A9J7II67
LinkDB
All DBs
Position
6:7332440..7340348
Genome browser
AA seq
602 aa
AA seq
DB search
MGHQLSEGSLEVIMNGGVYDKPIMQVLGSKKIQGSGANERFRLLVSDGKHSHSFAMLATQ
LNDKLISGELSDYSVVQIDRFVTSLLKNTGKGEKRVMIILDITIVTPGNEVGKKIGNPQT
WSEESAGAAPAQAAPAPAPRPAPSPAAKPMITPTPNLDSSLLSTQMTHPIASLSPYQNKW
VIKARVMSKSDIRTWNNARGEGKLFSMDLCDDSGEIRATAFKNECDKFYDMIQVDKVYYI
SRCQLKTANKQFTSMKNDYEMTFTANTVVAECMEDSSSVPSIKYEFVPINDIAAKNVDTL
LDVIGVCKSAADLQELTARSTGKLLKKRELILVDNSGGAVVLTLWGKEAENFDNNTNPVI
AVKGARLSEFNGSKSLSCLASSMIRQNPDLPEAHKLRGWYDNGGADMEINNISARVGGYT
GGSNEWITFSDAEARQLGSGDKGDYFSLLGVLTFTFADNAVYKACPQEQCNKKLVDQENG
LYRCEKCNREYPNFKYRLLLAANVSDATGDQRITAFNEAAEAILGKNVAEIGRLFEYDKT
GYTQMFEEVKFKTFVFKFRTKMETYNDEARLKTTVINVQPVDYKDANKKLIASIKTLSGV
EV
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatcaattatctgaaggctctttggaggtgataatgaacggaggagtgtatgat
aaaccaataatgcaagtactagggagtaagaagatacaaggcagtggcgctaatgaaagg
ttccgtctacttgtgtctgatgggaaacactcgcacagctttgctatgttagccacacaa
ctaaacgataaactgatatctggagaactgtctgactactctgtggttcagattgatcgt
tttgtcacttcattactgaaaaatactggcaaaggagagaaacgagtgatgatcatccta
gacatcacaatagtaactcctgggaatgaagttggaaaaaagattgggaaccctcagacg
tggagcgaggagtcggcgggagcggcgcccgcgcaggccgcaccggcgcccgcgccacgc
ccggctccatctcccgcagccaaacctatgatcactccaacaccaaaccttgactccagt
ctgctgtctacacagatgacacaccccattgctagtcttagcccctaccaaaacaaatgg
gtaataaaagcccgtgtgatgtccaagtctgatatccgcacttggaacaatgctcgagga
gaaggcaagctcttcagtatggacttgtgtgatgatagcggtgaaatccgggctacggcc
ttcaaaaatgaatgtgacaagttctatgatatgatacaggtagataaagtatactacata
agtcggtgtcagctgaaaactgctaacaagcagtttacgagtatgaagaacgattatgag
atgacgttcacagctaacacagttgttgctgaatgtatggaagactcgtcatctgtgccc
agtatcaagtacgagttcgtgcccattaatgatattgctgcgaaaaatgtcgatacattg
ctagatgtgattggtgtatgtaaatcggcagcagatcttcaagaactgactgctagaagt
acgggcaagttattgaagaagcgagaactgatcctagttgataactctggtggtgcagtt
gtcttgacactatggggaaaggaagctgaaaactttgacaacaacacaaacccagttata
gcagtaaaaggtgcgcgtctatccgagttcaacggtagcaagtccctatcctgtctagcg
agctccatgattagacagaaccctgatctcccggaagcacacaagttacgaggctggtac
gacaatggtggggccgacatggagattaataatatttctgccagagttggaggctataca
ggcggcagtaacgaatggatcaccttctctgacgctgaggctcgtcaactcgggtctggt
gacaaaggcgattatttcagtctcctcggagtacttacattcacgttcgctgacaacgca
gtgtacaaggcgtgtccccaagaacaatgcaacaagaaactcgtcgaccaagaaaatgga
ttgtacagatgtgaaaaatgcaacagagagtaccctaactttaaatacaggcttttattg
gcggctaacgtatcagatgcaactggcgatcagcgtataaccgcctttaacgaggctgcg
gaggcgattctcggtaaaaacgtcgcggaaatcggacgcttgttcgaatacgacaagact
ggctacactcaaatgtttgaagaagtcaaatttaagaccttcgtgttcaagttccgcacc
aaaatggagacatacaacgatgaagcccgtctgaaaacaacagtaattaacgtacaacca
gtagattacaaagacgccaacaaaaaattaatcgcaagcataaagacactctctggagtc
gaagtttag
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