KEGG   Spodoptera litura (tobacco cutworm): 111347834
Entry
111347834         CDS       T08157                                 
Name
(RefSeq) DNA-directed RNA polymerase II 16 kDa polypeptide
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
sliu  Spodoptera litura (tobacco cutworm)
Pathway
sliu03020  RNA polymerase
sliu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sliu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111347834
  09124 Replication and repair
   03420 Nucleotide excision repair
    111347834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sliu03021]
    111347834
   03400 DNA repair and recombination proteins [BR:sliu03400]
    111347834
Transcription machinery [BR:sliu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     111347834
DNA repair and recombination proteins [BR:sliu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111347834
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 111347834
NCBI-ProteinID: XP_022813971
UniProt: A0A9J7DN09
LinkDB
Position
6:complement(5232325..5233629)
AA seq 138 aa
MSGPIQDVVEEDAADLQFPKEFENAETLLISEVDMLLEHRKAQNESAEEEQEFSEVFMKT
LTYTNMFKKFKNKETIAAVRNLLQSKKLHKFEVASLANLCPETPEEAKALIPSLEGRFED
EELRILLDDIQTKRSLQY
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggacctatacaagatgttgtagaggaagatgcagcagatttacagttccctaaa
gagtttgaaaatgccgaaaccttgttgatatctgaagttgacatgttgttggagcacagg
aaagcccagaacgagtctgcagaggaggaacaagaattctctgaagtttttatgaagacc
ctcacatatacaaacatgtttaaaaagtttaaaaataaagaaactatagctgcagtcaga
aacctgcttcaatcaaagaaactgcacaagtttgaagtagcaagtttagctaatctgtgc
ccggagacaccagaggaggccaaggctctaataccatcactagaaggaagatttgaggat
gaagaacttaggatattactggatgatatacaaactaagagaagtttacaatactag

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