Spodoptera litura (tobacco cutworm): 111347961
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Entry
111347961 CDS
T08157
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sliu03009
]
111347961
Enzymes [BR:
sliu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111347961
Ribosome biogenesis [BR:
sliu03009
]
Eukaryotic type
90S particles
Helicases
111347961
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
PWI_Topors
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
111347961
NCBI-ProteinID:
XP_022814136
UniProt:
A0A9J7IGC2
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Position
6:complement(111163..117594)
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AA seq
619 aa
AA seq
DB search
MDAYDIFKKLTKGLTFKNKVLGVKNNGQVTKSSVKKEEKIEIKEEQVSDNEELNNGVENY
SGTESEDQTSDEEAQDDLQLVEGVKVTQEKKKKQKKEKTEDLKKKLELEEQNRFRNEHGI
KTVGRHVPAALQDFSELVSRYNVSQALVDTVKQCGYSEPTPVQRQAMACMLEDRQILACA
PTGSGKTAAFLVPILHALGAPQGGPRALVLCPTRELAQQIYREALRLSASSQLRCSVVRS
IKESKVKEREATIRKSDIIVSTPNRLCYLLNQDNVNISLDKIRWLVIDEADKLFEGSEDQ
SSDFRQQMEQILAACGSKQRRLAMYSATHTPRLAQWTRRHLRGLINITVGHRNAATNLVD
QELLFCGNESGKLVAFRQLVQQGLKPPVLVFVQSKDRAKQLFKELIYDGINVDVIHADRS
QLQRDNVVRSFRVGRIWVLICTELMGRGIDFRGVNLVINYDFPPSAIAYIHRIGRAGRAG
QRGRAITFFTQDDVANLRSIASVMQQSGCAVPEYMLQLRQDPNKRKKLLTKAPRRDNIST
RLEKRPDKRRLEAADEVMKADKAKSVDSIKNAKNNKNRRTQNLEQNKQKHDNTTDNKNNK
KRKKNNLANKKNNKKNVKS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctacgatatttttaagaaattaacaaaaggtttgacttttaaaaacaaagtt
ttgggcgttaagaacaatggccaagtaacaaaatcatcagttaaaaaagaggaaaagatt
gagataaaagaagaacaagtaagtgacaatgaagaacttaataatggtgtagaaaactac
tccgggacagagtctgaagaccagacctctgatgaggaggcacaggatgacttacaatta
gtggagggagtcaaagtgacacaggagaagaagaaaaagcagaagaaagaaaagactgaa
gatttgaaaaagaaactggagttagaagagcaaaaccgtttccgcaatgaacatggcatc
aaaacagtgggacgtcacgtgcccgcagcactacaagacttctccgagctggtgtctcgg
tacaatgtgtcgcaggccctggtggatactgtgaagcaatgcggatacagtgagcctact
cctgtacagagacaagccatggcatgcatgttggaagaccgtcaaatcctcgcctgcgct
ccaactggatcaggaaaaacagctgctttcctcgttcccatactccatgcactaggagct
ccgcagggcggtcctagagccctagtgctctgcccaaccagggagctggcacaacagatc
taccgtgaagctctaaggcttagtgcctcaagtcaactacggtgcagtgttgtcaggagt
atcaaggagtcgaaggtcaaggaacgagaggctactattaggaagagtgatataatagtg
agcacaccaaaccgtctctgttacttgctaaaccaagataatgtcaacatttcactagac
aaaatccgctggcttgtaatagacgaggcggacaaattgttcgaaggttcagaggaccag
tcgtcggacttcagacagcagatggaacagatcctggcggcctgcggcagcaagcagcgc
cgcctggccatgtacagcgccacgcacacgccgcgcctcgctcagtggacgcgacgacat
ctgcggggacttattaatattactgtgggacataggaatgcagcaactaacctagtggac
caagagctattgttctgtggcaacgagagcgggaaactggtggcattcagacaattagta
caacagggattgaaacctcctgtattagtgtttgtacagagcaaggatcgcgcgaagcag
ttgttcaaggagctgatatacgacggcatcaacgtcgatgttatacatgctgacaggtcg
cagttacagcgagacaacgtagtgcgcagtttccgtgtgggtcgtatctgggtgctgatc
tgtacagagctgatgggacgtggtatcgacttccggggagtgaacctcgtcatcaactac
gacttcccaccttctgccatcgcttatattcataggatcggtcgagcaggtcgtgccggt
cagagaggacgggccatcacattcttcacacaggacgatgtcgccaaccttaggagcata
gcgtcagtaatgcagcagtcaggctgtgcggtcccggagtacatgctgcagctgcgccag
gaccccaacaaacgcaagaagttgctgacgaaggcaccgcgcagggacaacatctctact
cgcctggagaaacgacctgacaaacgtagactagaagccgcagatgaagtaatgaaagca
gataaggcaaagtcagtagactcaataaaaaatgctaaaaacaataaaaatagaagaaca
cagaacttagaacagaacaaacagaaacacgacaacaccacagacaataaaaataataag
aagagaaaaaagaataatttagctaataagaaaaataataaaaaaaatgttaaatcttaa
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