KEGG   Spodoptera litura (tobacco cutworm): 111348030
Entry
111348030         CDS       T08157                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
sliu  Spodoptera litura (tobacco cutworm)
Pathway
sliu03030  DNA replication
sliu03410  Base excision repair
sliu03420  Nucleotide excision repair
sliu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sliu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111348030
   03410 Base excision repair
    111348030
   03420 Nucleotide excision repair
    111348030
   03430 Mismatch repair
    111348030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sliu03032]
    111348030
   03036 Chromosome and associated proteins [BR:sliu03036]
    111348030
   03400 DNA repair and recombination proteins [BR:sliu03400]
    111348030
DNA replication proteins [BR:sliu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    111348030
  DNA Replication Termination Factors
   ELG1-RFC complex
    111348030
Chromosome and associated proteins [BR:sliu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    111348030
DNA repair and recombination proteins [BR:sliu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     111348030
  Check point factors
   HRAD17(Rad24)-RFC complex
    111348030
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_lid_RFC1 RCF1-5-like_lid AAA_assoc_2 AAA_14 AAA_22 AAA_11 RuvB_N DUF815 AAA_16 AAA_5 AAA_30 AAA_7 DEAD PhoH ResIII nSTAND_NTPase5 AAA_19 Mg_chelatase Sigma54_activ_2 AAA_24 bpMoxR TFIIE_alpha LisH_TPL
Other DBs
NCBI-GeneID: 111348030
NCBI-ProteinID: XP_022814248
UniProt: A0A9J7DLH8
LinkDB
Position
6:complement(3388422..3398885)
AA seq 335 aa
MTVGEVSKNLPWVEKYRPSKLEELISHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTI
LACARQMYTPQQFNSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM
TNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLQQSQIVPRLKEVA
AAENVKLSEDGIKALLALSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRSDITKI
FNWLLTENDFAVCFQNIQDLKLAKGLALGDILTEVHTIIQRVKLPAEVLVSLLIKMSDAE
ARLASGCSERIELAALIAAFQIARDQVQIGTTDTS
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgacagtaggagaagtaagcaagaacctaccatgggtcgaaaaataccgtccttcaaaa
ttagaagaattgatatctcacgacgatattattaaaacaataaaccagtttatgaaggag
aaccaactacctcatttattattttacggccctcctggaactggcaaaacatcaacaata
ttagcttgtgccagacaaatgtacacaccacaacaatttaactcaatggttttggaatta
aatgcatcagatgatcgtggtataggtatagtgaggggacaaattcttagctttgcatca
accagaacaatattcaaagcagggcctaagctgataatattggatgaagctgatgctatg
actaatgatgcacaaaatgctctcagaagaattattgagaagtacacagagaacgtgcgt
ttctgcataatttgcaactatttgggtaaaataataccagcgctccaatcgagatgtact
cgcttccgcttcgcgccattacagcagagtcagatagtaccacggttgaaggaagttgct
gcagctgaaaatgtgaaattatcggaagacggaataaaagctttgctggctctctcgggt
ggggacatgaggaaagtcctgaataccttgcaaagtacgtggctcgcttaccgtgacgtc
accgaggacaacgtctacacctgcgtgggacatccgctccgctctgatattacgaaaata
ttcaactggctgctcactgaaaatgatttcgcggtttgctttcaaaatattcaagatctc
aaactagcaaagggattggctctcggggatattttgactgaagtacacacgataatccaa
agagtaaaattaccagctgaagtgctggtgtcgctgcttatcaagatgtcggatgctgag
gcgcggcttgcgtcaggttgtagcgaacgaatcgaactcgctgcgctcattgcggctttc
caaatcgctagagatcaagtacaaattggcaccaccgacacatcatga

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