Spodoptera litura (tobacco cutworm): 111348030
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Entry
111348030 CDS
T08157
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03030
DNA replication
sliu03410
Base excision repair
sliu03420
Nucleotide excision repair
sliu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111348030
03410 Base excision repair
111348030
03420 Nucleotide excision repair
111348030
03430 Mismatch repair
111348030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sliu03032
]
111348030
03036 Chromosome and associated proteins [BR:
sliu03036
]
111348030
03400 DNA repair and recombination proteins [BR:
sliu03400
]
111348030
DNA replication proteins [BR:
sliu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111348030
DNA Replication Termination Factors
ELG1-RFC complex
111348030
Chromosome and associated proteins [BR:
sliu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111348030
DNA repair and recombination proteins [BR:
sliu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111348030
Check point factors
HRAD17(Rad24)-RFC complex
111348030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_lid_RFC1
RCF1-5-like_lid
AAA_assoc_2
AAA_14
AAA_22
AAA_11
RuvB_N
DUF815
AAA_16
AAA_5
AAA_30
AAA_7
DEAD
PhoH
ResIII
nSTAND_NTPase5
AAA_19
Mg_chelatase
Sigma54_activ_2
AAA_24
bpMoxR
TFIIE_alpha
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
111348030
NCBI-ProteinID:
XP_022814248
UniProt:
A0A9J7DLH8
LinkDB
All DBs
Position
6:complement(3388422..3398885)
Genome browser
AA seq
335 aa
AA seq
DB search
MTVGEVSKNLPWVEKYRPSKLEELISHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTI
LACARQMYTPQQFNSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM
TNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLQQSQIVPRLKEVA
AAENVKLSEDGIKALLALSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRSDITKI
FNWLLTENDFAVCFQNIQDLKLAKGLALGDILTEVHTIIQRVKLPAEVLVSLLIKMSDAE
ARLASGCSERIELAALIAAFQIARDQVQIGTTDTS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaggagaagtaagcaagaacctaccatgggtcgaaaaataccgtccttcaaaa
ttagaagaattgatatctcacgacgatattattaaaacaataaaccagtttatgaaggag
aaccaactacctcatttattattttacggccctcctggaactggcaaaacatcaacaata
ttagcttgtgccagacaaatgtacacaccacaacaatttaactcaatggttttggaatta
aatgcatcagatgatcgtggtataggtatagtgaggggacaaattcttagctttgcatca
accagaacaatattcaaagcagggcctaagctgataatattggatgaagctgatgctatg
actaatgatgcacaaaatgctctcagaagaattattgagaagtacacagagaacgtgcgt
ttctgcataatttgcaactatttgggtaaaataataccagcgctccaatcgagatgtact
cgcttccgcttcgcgccattacagcagagtcagatagtaccacggttgaaggaagttgct
gcagctgaaaatgtgaaattatcggaagacggaataaaagctttgctggctctctcgggt
ggggacatgaggaaagtcctgaataccttgcaaagtacgtggctcgcttaccgtgacgtc
accgaggacaacgtctacacctgcgtgggacatccgctccgctctgatattacgaaaata
ttcaactggctgctcactgaaaatgatttcgcggtttgctttcaaaatattcaagatctc
aaactagcaaagggattggctctcggggatattttgactgaagtacacacgataatccaa
agagtaaaattaccagctgaagtgctggtgtcgctgcttatcaagatgtcggatgctgag
gcgcggcttgcgtcaggttgtagcgaacgaatcgaactcgctgcgctcattgcggctttc
caaatcgctagagatcaagtacaaattggcaccaccgacacatcatga
DBGET
integrated database retrieval system