Spodoptera litura (tobacco cutworm): 111348822
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Entry
111348822 CDS
T08157
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03022
Basal transcription factors
sliu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111348822
09124 Replication and repair
03420 Nucleotide excision repair
111348822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sliu03021
]
111348822
03400 DNA repair and recombination proteins [BR:
sliu03400
]
111348822
Transcription machinery [BR:
sliu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111348822
DNA repair and recombination proteins [BR:
sliu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111348822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
111348822
NCBI-ProteinID:
XP_022815489
UniProt:
A0A9J7IIM3
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All DBs
Position
8:complement(2553575..2569895)
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AA seq
574 aa
AA seq
DB search
MTTSSEDVLLSVSYVRFKKGDGTLYVMNQRLAWMLENRDTVAVSHKYADIKTQKISPAGK
AKVQLQVVLHDGTCSTFHFVNPAGAEAQAKDRDQVKMLLQNLLPKFKRQIDEELEMKSKL
LSLHPTLKHLYEDLVISKVINSEEYWNTPTLKTYTESNNIKQEAGVSGAFLADIQPQTDG
CNGLKYNLTQDIIDAIFKTYPAVRKKHVDYVPNKMTEAEFWTKFFQSHYFHRDRIASSSS
KDLFGECAKLDDQAIASAMKHTTLDLTVDLPQFTENIPLLPSEDEIAPEKEKGDNASIHR
NMIKRFNQHSIMVLKASHKTNSSNNNNNSSSKTTNNNKVVENGVKESNGVAEKRTAEDSS
TEAPDKKKRILEKIHYEDLEDKPGNEDAQELKLSKIERYLLGPSSQSQQTHTHTHNAPPL
SALSSICQAWSSGQQCQRPVRVSASACVGALGELSPGGALMRHHQAASMAQLIPPDVKSE
LHRIYLSGGELLRELWRCFPQPGAATDTEDATAKAEKFYEALLRFRNVKLRPFEEKMLRE
LTPLATTLTRHMNQMIDTACAKYAVWQQRQAKLR
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgactacgtcttccgaggacgtattgctcagtgttagctacgtgaggttcaagaagggt
gatggcactttgtatgttatgaaccaaaggttagcttggatgttagaaaatagagacaca
gttgctgtatcacataaatatgctgacattaaaacacaaaaaatatccccagcgggcaaa
gcaaaagttcaattacaagtggtgttacacgatgggacatgttctacgttccacttcgtc
aaccctgctggtgctgaagcccaggctaaagatagggatcaagttaaaatgctgctgcaa
aacttactgccaaagtttaagagacagattgacgaagagctggagatgaagtcaaaacta
ttatcgttacatccaacattgaagcatttatatgaagacttggtgatatcgaaggtgata
aatagtgaggaatactggaacacacccacactcaaaacgtatacggaatctaataatatc
aagcaggaagctggtgtgtccggagcatttttagcggatatacagccgcaaacggacggt
tgtaacggattgaaatacaaccttactcaagacataatagacgctatatttaaaacgtat
cctgctgtcagaaagaaacatgttgattatgtaccgaataaaatgactgaagccgagttt
tggactaagttttttcagagtcattattttcacagagaccgcattgcctcatcgtctagt
aaagatttgtttggagaatgtgccaaattggatgaccaggctattgcctcagccatgaaa
catactactctagatctcacagtcgacctcccacagttcacggaaaacatccccctacta
ccgtcagaagatgaaatagcgccagagaaggagaaaggagacaatgcatctatacacaga
aacatgatcaagcggttcaatcaacattctataatggtgctcaaagctagtcataaaaca
aattctagtaataataataataactcaagtagtaaaacgacaaataacaacaaagttgtc
gagaacggtgttaaagaatcgaatggagtagcagagaagagaacagcagaagacagtagt
acagaagcgccggacaagaagaagagaatattagagaagatacattatgaagatctagaa
gataagccgggtaatgaggatgcacaggaattgaaattgtctaagatagaaagatacctc
ctaggaccgtcgagtcagtcccagcaaacacacacacatacacacaacgcacctccttta
tcagcgctctcttcgatatgtcaggcatggtcaagcgggcagcaatgtcagcgtccggtg
cgagtgagtgcgagcgcgtgtgtgggcgcgctcggggagctcagtcccggcggggcactc
atgaggcatcatcaggccgcttctatggcgcaattaatacctccagacgtgaaatcagag
ctgcaccgtatatacctgtccggtggcgagctactcagggaactgtggcgatgtttccca
cagcccggcgccgccacggacacagaggacgccacagcaaaagcagagaagttctacgaa
gcactgctcagatttaggaatgttaaattgaggccttttgaggagaaaatgctccgcgaa
ttaacgccgctagcaacaacgttgacgcggcatatgaatcaaatgatagacacagcgtgc
gcaaagtacgcggtctggcaacaacgccaagccaaactgcggtag
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