Spodoptera litura (tobacco cutworm): 111350329
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Entry
111350329 CDS
T08157
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03020
RNA polymerase
sliu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111350329
09124 Replication and repair
03420 Nucleotide excision repair
111350329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sliu03021
]
111350329
03400 DNA repair and recombination proteins [BR:
sliu03400
]
111350329
Transcription machinery [BR:
sliu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
111350329
DNA repair and recombination proteins [BR:
sliu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
111350329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
111350329
NCBI-ProteinID:
XP_022817621
UniProt:
A0A9J7DT27
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Position
11:complement(8252522..8253680)
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AA seq
275 aa
AA seq
DB search
MPYANQPSVHITELTDDNVKFVVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS
DEFLAHRIGLIPLISDDVVDKIRYSRDCMCADFCSECSVEFTLDVKCTGDQTRHVTTADL
KSSDPRVVPVTSRHRDEDQADYGETDEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNMMRHTLYPKPDEWPKSEHTELDEDQYEAEFNWEAKPNKFFYNVESSGALK
PENIVLMGIVVLKNKLLNLQVQLAQEAQNDALAIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccttacgctaatcagccttccgttcatatcacagaattgacagacgacaatgtaaag
tttgtcgttgaagacaccgaacttagcgttgccaacagtatgagacgtgtgtttatagct
gaaacaccgacgatggctattgattgggtgcagttggaagccaattccactgtactcagc
gatgaattcctggctcaccgtatcggcctcattccgttgatatcagatgacgtcgtcgac
aaaattcgatattccagagattgtatgtgcgcagatttctgttcagagtgcagcgtagag
tttacccttgatgtgaaatgtacaggtgatcagacaagacacgttactacggctgactta
aaatcgagtgaccctcgagtggtgccggtgacgtcacgacatagggacgaggaccaggcc
gattatggtgaaactgacgaaatattaattataaaacttcgtaaaggacaggaattgaaa
ctgagagcatatgcaaagaaaggttttggaaaggaacatgcaaaatggaatcccactgcc
ggagtctcctttgaatatgacccggacaacatgatgaggcatacactgtaccctaaacct
gatgagtggcctaaaagtgaacacactgagttggacgaggatcagtatgaagcagaattt
aattgggaagctaagccaaacaaattcttttacaatgttgagtcatccggagcactcaaa
ccagaaaacatagtactgatgggtatagttgtgttgaagaacaaattgctcaatctacaa
gtacagttagcacaagaagcccagaatgatgcattagctatcaattaa
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