Spodoptera litura (tobacco cutworm): 111350409
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Entry
111350409 CDS
T08157
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03013
Nucleocytoplasmic transport
sliu03015
mRNA surveillance pathway
sliu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111350409
09122 Translation
03013 Nucleocytoplasmic transport
111350409
03015 mRNA surveillance pathway
111350409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111350409
03041 Spliceosome [BR:
sliu03041
]
111350409
03009 Ribosome biogenesis [BR:
sliu03009
]
111350409
03012 Translation factors [BR:
sliu03012
]
111350409
Enzymes [BR:
sliu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111350409
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111350409
mRNA cycle factors
Stress granule specific factors
111350409
Spliceosome [BR:
sliu03041
]
Complex C
Other components
EJC/TREX
111350409
Ribosome biogenesis [BR:
sliu03009
]
Eukaryotic type
90S particles
Helicases
111350409
Translation factors [BR:
sliu03012
]
Eukaryotic type
Initiation factors
eIF-4
111350409
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
TniB
UvrD-helicase
AAA_30
Utp25_C
Motif
Other DBs
NCBI-GeneID:
111350409
NCBI-ProteinID:
XP_022817748
UniProt:
A0A9J7DUY5
LinkDB
All DBs
Position
11:9985803..9989403
Genome browser
AA seq
405 aa
AA seq
DB search
MTSSEVSYNRKIITEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ
RSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQKVI
LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL
DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL
TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSS
MHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIG
RSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacttcatcggaggtttcttacaatcgcaaaataataacggaagatttgtcgaatgtc
gagtttgataccagtgaagatgtggaagttataccaactttcgattcaatgggcttacga
gatgagttgctacgaggaatctacacctatggtttcgagaagccgtctgcaattcagcaa
agaagtatattgccaatcgtgaaaggaagagatgtgatagcccaagctcagtctggtaca
ggcaaaacagccacattctcaatttccattctgcaatccctggacacgactttacgtgaa
acccaagtcctggtgttgtcgccaactcgggagttggctactcagatccaaaaagtgata
cttgctttgggtgacttcatgaatgttcagtgtcacgcttgtatcggaggcacgaatctt
ggagaagatatcagaaagctggactatggacagcatgttgtctcaggaacaccaggacga
gtttttgatatgattcgccgacgcgtactaagaacccgttcgatcaagatgctggtcctt
gatgaagctgacgagatgttgaacaaggggttcaaagagcagatctatgatgtataccgc
tatttgccacctgcaactcaagtagttcttatttctgccacattgccccatgaaattttg
gaaatgacctcgaagttcatgacagatcctatcagaatcctggtcaaacgtgatgagttg
acactagaaggaatcaagcaattcttcgtagcagtagaacgtgaggaatggaagtttgac
accctctgtgatctttatgataccttaacaatcactcaggcagtgatcttctgcaacaca
aagagaaaggtggactggctcacacaaaagatgcaggaagctaacttcacagtcagctca
atgcacggagacatgcctcaaaaagaaagagataacattatgaaggagttccgttctggt
caaagccgtgtactcatcacaactgatgtttgggcgcgaggtatcgatgtgcaacaagtg
tccctagtcatcaactacgatttgccaaacaaccgtgagctgtacatccacaggatcggc
agatcaggacgatttggacgcaaaggtgtggccatcaactttgtcaaatctgatgatatc
aggattcttagagatattgaacagtactactccactcaaattgatgagatgccaatgaat
gtggctgatttaatataa
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