Spodoptera litura (tobacco cutworm): 111350444
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Entry
111350444 CDS
T08157
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111350444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111350444
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111350444
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
111350444
NCBI-ProteinID:
XP_022817803
UniProt:
A0A9J7DSY5
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Position
11:11779781..11784306
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AA seq
221 aa
AA seq
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MEVENTDLKDFKLRPMKCECNFLSKSDGSAILSQGQTVALVSVNGPLDIKMTSQSIEKAT
LEVLFTSKVGKPSVADRYKEHVIRQTCESAILGSLYPRTGITVTIQELEDYGGFTVCSIN
CACLALLNAGVAMRHTFAGVSCAVDEHGNIQLDPDATQLETARATMNFVFDSREKRLITS
LTNGSFSEDAYKEALERCRSASQLVFDFYKDIVSKYSYVIG
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcgagaacactgatttaaaagattttaaactgaggccgatgaaatgcgagtgc
aactttctgagtaaatccgatggatcggctattttgtctcaaggtcaaaccgtggcacta
gtgagtgtgaatggccctctagacattaagatgactagccagagcatagagaaggctaca
cttgaggtcctattcactagcaaggttggcaaaccttcagtagcagacagatataaggag
catgtgatcagacagacatgtgagagtgctatcctgggcagcctgtacccgagaactggc
atcacagtcactatacaggagctggaggactatggtggtttcacagtatgttcaataaac
tgtgcatgcctggcgttactgaacgcgggcgtagcgatgcggcacacgttcgccggcgtg
tcctgcgccgtggacgagcacggcaacatacagctcgaccccgacgccacgcagcttgag
acagctcgcgccaccatgaactttgtcttcgatagcagagagaagaggttgattacttcc
ctaacaaacggcagttttagtgaagatgcttataaagaagccctcgagcgctgccggtca
gctagccaactagtgttcgatttctataaggatattgttagcaaatactcttatgttatt
ggataa
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