Spodoptera litura (tobacco cutworm): 111350528
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Entry
111350528 CDS
T08157
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111350528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111350528
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111350528
U7-dependent histone pre-mRNA processing factors
111350528
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
SAP
Motif
Other DBs
NCBI-GeneID:
111350528
NCBI-ProteinID:
XP_022817916
UniProt:
A0A9J7IJV1
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Position
11:2515460..2528118
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AA seq
729 aa
AA seq
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MTSIIKLHCLSGAGNEAPPCYVLQIDEFKFLLDCGWDENFDMDFIKELKRHINTIDAVLI
SHSDPIHLGALPYAVGKLGLNCPIYATLPVYKMGQMFMYDLYQAHRNVSDFDLFTLDDVD
AAFDRIVQLKYNQSIDMKGKGLGLRITPLPAGHSLGGTVWRIAAPGEEDIVYAPDFNHKK
ERHLNGCEIERLMRPSLMLLGAMNADYVQQRRRLRDEKLMTTILSTLRGGGCVLVCSDTA
GRVLELAHMLDQLWRNKDSGLVAYSLLLLSNVSYNVVEFAKSQIEWMSDKLTRAFEGARS
NPFALRHLQLCHSVGEVSRTPGPKVVLASFPDLECGFARDLFLLWAPNSQNSIVLTARSS
PGTLARDLIEKGGDRTIELNVRRRVRLEGAELEEYLQNQRIKINNTVKEETAGISSDSDS
DGELEMWVVTGKHDIPVRHDVRATGYFKTNKRHHAMYPFHEERTRADDYGEMIKPDDYRL
AEIVDAEGEIRDVPPAPPPKQEPDEEMTEIPSKCVSSLRQVQIKANIQYIELEGRCDGES
LLRVVTQAKPRAIVGLRANPGALMTLRKHCEAEGIEKIYIPSVGDIIDATTESHIYQVKL
TDSLMSGLAWRSAGDTELAWLSAVVTPRAHQRENTTTSEEATSDVSMCLEAAPGGAHAAS
FVNSLRLSELRAALSKLGLTTEFTAGALECCNGTLAIRRLENGRVALEGVLSEEYYKVRE
LLYEQFAIV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgatcatcaagttacactgcctctcaggggctggtaatgaggctccaccatgt
tatgtgctgcagatagacgaatttaagttcctactagactgcgggtgggacgaaaacttc
gacatggacttcataaaagaacttaaaagacacataaacacaatagacgcagttttaata
tcacactcagaccctatccacctcggagccctaccatacgccgttgggaagctcggtctg
aactgtcccatatatgcaactctaccggtatacaaaatgggacagatgttcatgtatgac
ttgtaccaggcacatagaaatgtgtcagactttgatctgtttacattggacgatgttgat
gctgccttcgataggatcgtgcagctgaagtataaccagagtattgatatgaaaggaaaa
ggcctaggtcttcgtattacaccgctacctgctggccactctctaggaggcacagtatgg
cgcatagcagctcccggtgaagaagacatagtttatgctccagacttcaaccataaaaag
gaaagacatttgaatggatgtgagatcgaaagacttatgcgaccttccctgatgctgttg
ggcgctatgaatgcagattatgtgcagcagaggagacgattgagagatgagaagcttatg
accacgatcctgagcacgctgcgcggcggcggctgcgtgctggtgtgctcggacacggcc
ggccgcgtgctggagctggcgcacatgctggaccagctgtggaggaacaaggactccggc
ctcgtcgcgtactcgctgctactgctgtccaacgtcagctacaacgtcgtggagtttgcc
aagtcacagatagaatggatgagtgacaaactgacccgtgcatttgaaggagctcgcagc
aatcccttcgcactccgtcaccttcaactatgtcactccgttggtgaggtcagccgtact
ccaggacctaaggtcgtactggcttccttcccggacttggagtgtgggttcgcaagagac
ttgttccttttgtgggctcctaactcacagaattctattgtgttgacagctcgatcatcc
ccaggcaccctagcccgcgacctgatagagaagggcggcgaccgcaccatagaactgaac
gtgcgccgccgcgtcagactcgagggcgctgaactagaggagtacttacagaaccagagg
atcaaaatcaataatactgtcaaagaagaaacagcgggcatatcatcagactcggactct
gacggcgagctggagatgtgggtggtgacagggaaacatgacataccggtgcgacacgat
gtacgagccaccgggtacttcaagactaacaaacgacatcacgccatgtacccattccat
gaggaacggaccagagctgatgattatggagaaatgatcaagcctgatgactaccgactg
gctgaaatagtggatgcggagggggaaatcagagacgttccccccgccccgccaccgaaa
caggaacctgatgaggaaatgacagagattccaagcaagtgtgtgtcctcgctgcgtcag
gtacagatcaaggcaaacatccagtacatcgagctggaggggcgctgcgacggagagtcc
ttgctgcgggtcgtcacgcaggccaagccgcgcgccatagtcggccttagagctaaccct
ggagctctgatgacgcttagaaaacactgcgaggctgaaggtatagagaagatctacatt
ccgtctgtcggcgacatcattgacgcgaccacagagtcccatatctatcaagtgaagttg
actgacagcctgatgtcggggctggcgtggcgctcggccggcgacaccgagctcgcctgg
ctctctgccgtcgtcacgccccgggcccaccaacgggaaaatactactacctcggaagaa
gcgacgtcggacgtgtcgatgtgcctggaggcggccccgggcggcgcgcacgcggcctcc
ttcgtcaactcgctgcgactgtccgagctgcgcgccgcgctcagcaagctcggcctcacc
accgagttcaccgcgggcgcgctcgagtgctgcaatgggacgcttgctatacgccggttg
gagaacggccgcgttgcactggaaggtgtcctgtctgaagagtactacaaagtgagagag
ctgttgtacgaacagttcgccatagtctga
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