Spodoptera litura (tobacco cutworm): 111350888
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Entry
111350888 CDS
T08157
Name
(RefSeq) exosome complex component MTR3 isoform X1
KO
K12587
exosome complex component MTR3
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111350888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111350888
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111350888
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
HIT-like
Med22
Motif
Other DBs
NCBI-GeneID:
111350888
NCBI-ProteinID:
XP_022818370
UniProt:
A0A9J7IMI9
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Position
12:complement(3589398..3615788)
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AA seq
310 aa
AA seq
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MPLDYRRFNGPEDSIPYKRFTKDFVKSYDELFKELLDDKGVRKDGRALSEARSMCMFFAR
ADMVSQAKGSAYVELRKTKVVCSVFDPREIPHQNEFSELGQIFCEVKFAPFSCPRRRRPH
APDAEEKALSVALRKALEPSVCRHMFPNYQVDVFIYILENDGACLSAAINAAGLALADAA
VPMYDIITSCTVAVIGDKMFVDPTEAEEYLATTNPDTPINHGLLTLSTLSELKQISDFIQ
IGSMDVVSVTNAMEVLEQECEKLVPLVQKVLVGNVLKCFDQRKRLEEEANEREKALNSKM
EEWKKLLNAG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcgattaccggagattcaatggacctgaagatagtataccttacaaacgtttc
actaaagactttgtgaagagttatgatgaacttttcaaggagttactggacgataaggga
gttcgtaaagacgggcgcgctttatccgaagcgcgtagcatgtgtatgttttttgcaaga
gcggacatggtttcacaggcgaagggatccgcttacgttgaacttcggaaaacaaaggtc
gtttgttctgtgttcgatccacgagaaattcctcatcagaatgaatttagtgaacttggt
caaatattctgtgaagtgaaattcgcgccattttcgtgtccgcgtaggcggcggccgcac
gctcccgacgctgaagaaaaagctttatctgtggcactaaggaaagctctagaaccctcc
gtttgcagacacatgttccctaattaccaggttgatgtcttcatatacattctggaaaat
gatggagcatgcttatcggcagcaataaacgctgctggcctggcattagcagatgctgcg
gtcccaatgtacgacatcataacatcctgtaccgtcgctgtcatcggagacaaaatgttt
gtggaccctaccgaagctgaagagtacttagcaacaacaaacccagatacaccaataaat
catggattacttacactgtctacgttatccgaattgaaacaaatatcagactttattcag
ataggatcgatggatgttgtcagtgttacaaatgcaatggaagttttagaacaagagtgt
gagaaacttgtaccgctggtccagaaagtgctagtaggtaatgtactgaagtgctttgac
cagagaaaacggttggaggaagaagctaatgaaagagaaaaggctttaaactccaagatg
gaggaatggaaaaaattattaaatgctggatga
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