Spodoptera litura (tobacco cutworm): 111351328
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Entry
111351328 CDS
T08157
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111351328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sliu03041
]
111351328
03009 Ribosome biogenesis [BR:
sliu03009
]
111351328
Enzymes [BR:
sliu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111351328
Spliceosome [BR:
sliu03041
]
Complex A
U2 snRNP components
U2 related factors
111351328
Complex B
111351328
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
111351328
Ribosome biogenesis [BR:
sliu03009
]
Eukaryotic type
90S particles
Helicases
111351328
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
Cas3-like_C_2
ABC_tran
Flavi_DEAD
T2SSE
AAA_25
AAA_7
Motif
Other DBs
NCBI-GeneID:
111351328
NCBI-ProteinID:
XP_022818999
UniProt:
A0A9J7IM49
LinkDB
All DBs
Position
13:complement(6869231..6885099)
Genome browser
AA seq
736 aa
AA seq
DB search
MSKRRIEVMDPFIKKKREEKAAAAAKSGGSGESSESALATLGTSMPPTATSTPGVNPFTG
LPHSQRYHELLRRRLGLPVWEYKNDFMRLLNTHQCVVLVGETGSGKTTQIPQWSVEFAAV
TAGKSKGVACTQPRRVAAMSVAQRVAEEMDVALGQQVGYSIRFEDCSGPQTILKYMTDGM
LLREAMSDPMLEQYRVILLDEAHERTLATDILMGVLKEVIKQRADLKLVIMSATLDAGKF
QQYFDNAPLMNVPGRTHPVEIFYTPQPERDYLEAAIRTVIQIHICEEIAGDILLFLTGQE
EIEDACKRIKREIDNLGPDAGELKCIPLYSTLPPNLQQRIFEPAPPNRANGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKNEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALDDDGNLTDLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVQQCF
VRPNEARKAADEAKMRFAHIDGDHLTLLNVYHAFKQNMEDPHWCYDNFINYRSLKSGDNV
RQQLSRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGHYLTVKDNQVVQ
LHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLKIAPQYYELNNFPQCEARRQL
ELLQARLDSKAYQEGF
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgtcgtatcgaagtgatggatccctttatcaaaaagaaaagggaagagaaa
gcagccgcggctgccaagtcgggcggtagtggcgagtcctcagagtctgcactggcaaca
ctaggcaccagcatgcctcctactgctaccagcacaccgggggttaacccattcaccggt
ttaccccactcccagcggtaccacgagctcctccgccgacgtctcggtctcccagtatgg
gaatacaaaaacgatttcatgagactcctaaacacccatcaatgtgttgtcctagtcggt
gagactggctcgggcaaaaccacacaaataccgcaatggtcggtcgaattcgctgccgtt
acagcaggcaaatccaaaggcgtagcctgtacacaaccgagaagagtggccgccatgtca
gtagctcaaagagtagctgaagaaatggacgtagcactgggccagcaagtcggttacagc
atccgttttgaggactgttccggaccacaaaccatactaaagtacatgacggacggtatg
ttgctcagagaagcgatgtcggatcccatgctggaacagtacagagttatacttcttgac
gaggctcacgagaggactttggctacagatatcctcatgggagtcctaaaagaggttata
aaacagagggccgaccttaaactagtcatcatgtccgctacattagacgctggcaagttc
caacagtacttcgacaatgctccgttaatgaatgtccctggtagaactcatcctgtagag
atattctacacaccacagcctgaaagagattacctagaagcagctatccgcactgtcatc
caaatacacatttgtgaagaaattgccggagacattttgctgtttttgactggacaggag
gagattgaggatgcctgtaagagaatcaagagggaaattgataatttaggtcctgatgct
ggggagttgaagtgtatacccttatattctacgctacctcccaacttacaacagaggatt
ttcgagccagcgccgcctaatcgcgcaaacggagctatcggacggaaagttgtagtgtct
actaacattgccgagacgtcgctgactatagatggcgtggtgttcgtgatagaccctggt
tttgctaagcaaaaggtctataaccctcgtattcgtgtcgagtctctccttgtgtcgcca
attagtaaggcgtccgcccaacagagggcgggccgcgccggtaggacgcgaccgggtaaa
tgcttcagactgtacacagagaaagcgtacaaaaatgaaatgcaagacaatacttatccg
gaaattttaagatcaaacttaggatctgtagttttgcagttgaaaaaactcgggatagac
gacttggtgcatttcgattttatggacccccccgcgcccgagacgctgatgagagcactc
gagctactaaactacttggctgcactggacgacgatggcaacctaacagacctgggcgcg
gtgatggcggagttccccctggatcctcagctcgccaagatgttgatcgccagctgcaac
cataactgctccaatgagatcttatctatcactgctatgttgtcagttcaacaatgcttc
gtgcgtccgaacgaggcccgcaaggcggcggacgaggccaagatgaggttcgcacacatc
gacggagaccatctcacgctgctcaacgtataccatgcatttaaacagaatatggaagac
ccacactggtgctatgacaacttcatcaactaccgctcactgaagtccggagacaatgtc
cgtcagcaactcagcaggatcatggataggtttaacttgaagaggacgagtacggagttc
acaagcaaggactactatatcaatataaggaaagctctagttaatggattcttcatgcag
gtcgcccacctcgagcgcacgggccactacctgacggtgaaggacaaccaggtcgtgcag
ctgcaccccagcacgtgcctcgaccacaagcccgactgggtcatatacaacgagttcgtg
ctcaccaccaagaactacatacggaccgtcacggacattaaaccggaatggctcctaaaa
atagctccacagtactacgaactcaacaacttcccacaatgcgaggcgcggcgacagcta
gagttacttcaggcgagactcgactccaaagcctaccaggaaggattctag
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