Spodoptera litura (tobacco cutworm): 111351469
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Entry
111351469 CDS
T08157
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111351469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sliu03041
]
111351469
Spliceosome [BR:
sliu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111351469
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
PRP4
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_DCAF4
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR41
WDR90_beta-prop_4th
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
111351469
NCBI-ProteinID:
XP_022819167
UniProt:
A0A9J7E060
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Position
13:complement(283841..300564)
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AA seq
552 aa
AA seq
DB search
MSDDDDVVLVKKPKQVHYGSLEEQEKARLAALAAAAKEGAEDIGGKDLGDIQISSEYMEL
EEEMSRDKKALLEEFERRRKARQLNVSTDDDEVRRSLRQLGEPVCLFGEGPAERRVRLRD
LLSYLGEDAIHKKLEEEEARIERDRGREGTWYHEGPPELREARLWIARYSLPKAKLRLCQ
AREDLKLSGSVRAAAKQESQRKAAAVSIYCSQIGDTRPISFCRFSSDSKMLITASWSGLS
KVWSVPECTALQVLKGHKCNVSGAAFHPTAAMPDHFERKLAEDKEKLATDAETPMETETP
VPESIETTVAMQETDGVSEACTMATCAYDGTVYLWNFKSESPLCSLDGHSPARVARLEFH
PSGRFLATTVFDHSWRLWDLETATEVLHQEGHAKPVYSIAFQGDGSLAVTGGMDAFGRVW
DLRTGRCVMFLEGHLGPVLGSDWAPAGHQLATAAADHQTKIWDLRRRSALYTIPSHTHLL
SDVRYQKSHGHFLLTSSYDKTAKLWSNPAWHPLRTLSGHDNKVMSADISYDNKYIATSSY
DRTFKLWAPDLA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgatgatgttgtgttggtaaagaagcctaaacaagtgcattatgggtct
ctggaggagcaggaaaaggccaggctggccgccctggctgctgcagccaaggaaggggcc
gaggacattggcggaaaggatttgggggacatacaaatttctagcgaatacatggagctg
gaagaggagatgtctcgcgacaagaaggctctgctggaggagtttgagcggagacgcaag
gctcgacagctcaacgtgtccactgatgatgacgaggtgcgtcgcagtctccgtcagctc
ggcgagccggtgtgtctgttcggagaggggccggcagagaggcgagtgcggctgcgagat
ctcctcagctatctaggagaagacgcgatccacaagaagctagaagaggaagaggctcgc
atagaaagggacagaggacgggagggaacctggtaccatgagggaccgccggaactcagg
gaggcgaggctgtggatcgctaggtactcgctacctaaagctaaacttagactgtgccaa
gcccgcgaagacttgaagttatcaggcagtgtccgcgccgccgccaaacaggagtcacag
cggaaggccgccgccgtctctatatactgcagccagataggcgacacccggcctataagc
ttttgcagattcagcagcgacagtaagatgctcatcacagctagctggtcaggtctatcc
aaagtatggtcggtccccgagtgtacagcgctgcaagtactgaagggtcacaaatgtaac
gtcagcggcgccgccttccatcccacggccgccatgcctgatcattttgaaagaaaatta
gcagaagataaagagaagttagcaacagacgccgaaactccgatggagactgagactccg
gtcccagagtctatagaaactacagtagccatgcaggagactgacggagtctccgaagcc
tgcacaatggcgacctgcgcgtacgatggtaccgtatatttgtggaattttaaaagtgag
tctccgctatgttccctggacggccacagccccgcccgcgtggccaggctggagttccac
ccgtccggacggttcctcgccaccactgtcttcgaccactcctggagattatgggatctg
gagactgcgacggaggtactgcaccaggaaggtcacgccaagccggtgtacagcatcgcc
ttccagggagacgggtcactcgctgttacaggcggtatggacgccttcggtcgcgtgtgg
gacctgcgcacaggtcgctgcgtgatgttcctggagggccacctggggcccgtgctgggc
tccgactgggcccccgccggacaccagctcgccaccgccgccgcagaccatcagacaaag
atctgggatttgaggagacgttcagcgttatacactataccttcacacacgcatctgttg
agtgatgtcagataccagaagagccacggtcacttcctcctaacgtcatcgtacgacaag
actgccaagctctggtccaaccctgcctggcatccactgcgcacactctccggacatgac
aataaggtgatgagcgctgacatatcatacgacaacaagtacatagcgaccagctcatat
gacaggaccttcaaactgtgggcaccagatctcgcgtag
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