Spodoptera litura (tobacco cutworm): 111351526
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Entry
111351526 CDS
T08157
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111351526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111351526
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111351526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
DO-GTPase2
AAA_22
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
111351526
NCBI-ProteinID:
XP_022819255
UniProt:
A0A9J7INE9
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All DBs
Position
2:complement(10480825..10483462)
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AA seq
675 aa
AA seq
DB search
MARHRDFRNRTFSDDYDDDDVYGHSVEEDSCMSPSDAAQWIYDRSRNQQIQFLQNHNNIQ
EETEEDLADTSFSSQERRESIDLRSLNLDEEDEAKLMSCLDELRNVIGEAVSDNILIQTV
IKHNFDFSKSLDDILNRKSKEPEVPKPELVKPVVLIDPVKAPVITTVENTPKVVATNLEP
KTVGVVKGFKVGQDGSSSSRPQTPRDQSPCTERFSKTEQVDEIKSTPKVKENKVDANTLY
VNERGSDKDHLYIVVIGHVDAGKSTLMGRLLCEMGEVSQKTLHKYEQESKKIGKQSFMYA
WVLDETGEERVRGITMDVGRAQFETKTKRVIILDAPGHADFIPNMITGAGQADVALLVVD
ATRGEFESGFDLGGQTREHALLVRSLGVSQLAVAVNKLDTSNWSQERFNEITKKLKAFLK
QAGFKDSDVTYVPCSGLTGENLVKSPTEAELLKWYNGPCLLDVIDKFNVPERPVSKPLRF
SINDVYKGTGSGFCVAGRIENGVINKGDKVLVCPTKEMAEVRNISINEMPSNVAFAGDQV
SVTLTGVDMQNVSVGYVLSDPIQQVPVTTRFEARIVVFNVKVPITKGFPVLIHHQSLVES
ANIVKLKALLNKSTGELVKKKPRCLGNNCVAVVEVEVCRPICVERYKDVKELGRVMLRVA
GTTIAAGLVTDIVNT
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcaccgtgactttcgaaataggactttttctgatgactacgacgacgacgat
gtttatggacactcagtggaagaagatagttgtatgtcgccaagcgacgcagcacagtgg
atatatgaccggagccgcaaccagcagattcaattcttgcagaaccataataacatccaa
gaagagactgaagaagacttggcagatacaagtttctcttcacaggagcgacgtgaatcc
atagacttgcgaagcttaaacctcgatgaagaagacgaagccaagcttatgtcttgcttg
gatgaacttagaaatgttatcggtgaagctgtttcagacaacattcttatacaaactgta
attaagcacaattttgacttcagtaagtctcttgatgacatattgaatagaaaaagtaag
gaacctgaggttcctaagccagaacttgtgaaacctgtagtcctcatagatcctgtaaag
gctcccgttattactactgtagaaaatactccaaaagttgtagcaactaatttagaacca
aagactgttggtgttgttaaaggattcaaagttggacaagatggcagctctagcagtcga
cctcagacacctagagaccaatcaccttgcacagagaggttttcaaagactgaacaagtt
gatgagattaaatcaacacccaaggtaaaagaaaataaagtagatgccaatacactgtat
gtaaatgagcgaggatcagacaaggatcacttgtatatagtagtaataggccatgttgat
gctggcaagtctactctgatgggcaggctactatgtgaaatgggagaagttagtcaaaaa
actctgcacaaatatgaacaagaaagtaagaaaattggcaaacagagcttcatgtatgca
tgggtgttagatgaaactggagaagaaagagtaagaggcatcacaatggatgttggacga
gctcaatttgaaacaaagacaaaaagagttataatattagatgcaccaggtcatgcagac
ttcattcccaatatgataacgggtgctggccaagcagatgttgctttactggtggtggat
gccactcggggagaatttgagtcaggttttgacttgggaggtcagacaagggagcatgct
ctactagtacggtcacttggagtaagtcaacttgctgtagctgttaacaaattagacaca
tccaattggtctcaagaaagatttaatgagatcacaaaaaaactaaaagcattcttgaaa
caagctggcttcaaagactctgatgtcacatatgtgccatgttcaggattgacaggggag
aacttagtgaagtctccgacagaagctgagttactgaaatggtacaatggaccttgcctt
ttagatgttattgataaattcaatgttcctgagagacctgtgtcaaaacctttgcgcttt
tctataaatgatgtgtataaaggtactggatctggcttctgtgtggcaggccgcatagag
aatggtgtaatcaataaaggagacaaagttcttgtgtgccccactaaagaaatggctgaa
gttagaaatataagcattaatgaaatgccaagcaatgttgcttttgctggagaccaggtc
agtgttacactgactggagtagacatgcagaatgtttctgtgggatatgtattaagtgat
cctatccagcaagttcctgtcaccacaaggtttgaagccagaattgtagtttttaatgtc
aaagtacctatcacgaaaggatttccggtactcattcatcatcaatcactggttgagtct
gcaaacattgtgaagttgaaggctttattgaacaaaagtactggagagttggtaaagaag
aagcctcgatgtctgggaaacaactgtgtggctgtcgttgaggtagaagtgtgtcggccc
atctgtgtggaacggtacaaggatgtgaaggagttaggacgcgtgatgctccgcgttgct
gggacaactatagctgctggtcttgtcactgacatagtcaacacatga
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