Spodoptera litura (tobacco cutworm): 111351573
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Entry
111351573 CDS
T08157
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111351573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sliu03041
]
111351573
Enzymes [BR:
sliu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111351573
Spliceosome [BR:
sliu03041
]
Complex C
Other components
Step II factors
111351573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
GIPC1_GH2
Flavi_DEAD
nSTAND3
AAA_30
AAA_16
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
111351573
NCBI-ProteinID:
XP_022819323
UniProt:
A0A9J7DXW9
LinkDB
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Position
14:complement(73172..80097)
Genome browser
AA seq
1269 aa
AA seq
DB search
MDEVAKLEHLSLVSKVCTELDNHLGLNDKDLAEFIIDIADKNPAFDGFKKALIENGAEFS
DSFMTNLLRIIQHMKPINNATQKTAPQENANPLANKFPGLAIPNEKPPKFSSDEESEEED
EDKKDKRLTAKDIFLEESKTKINDAVVDQAMAELEALAPSQSTSVKEPLKKEITKDEVKK
RERSRSRDRKETSRKRERSRERDRDRKSRRSRSRDRRSHSRDRRSRSRDRDRRRRSRSRP
TSSRHRSRDRHRRSKSRGRTSPLRGRNSPSRGRNSPSRSRRSPSREREHKYNDYGKKPRK
RSPEVEMSDDPEPGKIYNGRVANIVPFGCFVQIEGVRKRWEGLVHISQLRSEGRVTNVSD
VVNRGDKVKVKVLSVTGQKVSLTMKDVCQDTGKDLNPTSHAHLEAEREGRNPDRPPPNAT
VLAGLQGGLDPDEDSSRKRVTRISSPERWEIKQMISSGVIDKSELPDFDEETGLLPKDED
GEADIEIELVEEEPPFLQGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKML
QREQEMESLPMGLNKNWIDPLPESDGRALAANMRGTGITPQDLPEWKKHVIGGKKSSFGK
KTNLSLLEQRQSLPIYKLRDELTKAVADNQILIVIGETGSGKTTQITQYLAECGLTARGK
IACTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLM
DLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQYFFEA
PIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEI
LYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIY
YVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEM
LPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALEQLHSLSALDSEGL
LTRLGRRMAEFPLEPNLSKILIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKK
AKFNQPEGDHLTLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLD
VVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYH
ELVQTTKEYMREVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWR
ISRVRRRRN
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttgctaaattagagcatctttcacttgtgtcaaaagtgtgtactgagctg
gacaatcatttaggattaaatgacaaagacttagctgagttcataatagacatagctgat
aaaaacccagcatttgatggtttcaagaaagctttgattgaaaatggagctgaattctca
gattcatttatgaccaacttgctgcgaatcatacagcatatgaaacccataaacaatgct
acacaaaaaaccgcaccacaggagaatgcaaacccattggctaataagtttccaggactt
gcaatacctaatgaaaaacctcccaaattctcatccgatgaagaaagtgaagaagaggat
gaagataagaaggacaaaagactgactgcaaaggatatatttctagaagagtcaaaaact
aagataaatgacgctgtggtagatcaagccatggctgagctagaggctctggcaccttca
caatcaacttctgtaaaggaaccgctaaaaaaagaaatcactaaagatgaagtaaaaaaa
cgtgaaagaagtcgcagcagagataggaaagaaaccagtagaaaaagggagagatctaga
gagagagatagggatagaaaaagtaggcgtagtagaagtagagacagaagaagccatagt
agagaccgtaggagtagaagtagagatagagataggaggagaagatctaggagccgtcct
acttccagtcgtcacaggtcaagggataggcataggagatccaaatctcgaggaaggaca
tccccattaagaggaagaaattctccatcaagaggaagaaattctccatcaagaagtaga
aggtcaccatcaagagaaagagaacataaatacaatgattatggcaagaaaccgaggaag
aggagtccagaagttgaaatgagtgatgatcctgaacctgggaaaatttataatggcaga
gtagcaaacattgtgccatttggttgttttgtacaaattgagggagtgaggaagcggtgg
gagggcctggtgcacatctctcagctgcggtcagaaggacgcgtcaccaatgtgtctgat
gtcgtcaatagaggggataaagtcaaggtgaaagtgctctcagtaactggacagaaggtg
tctcttactatgaaggacgtgtgccaagacactggcaaagatctgaacccgacgtcacat
gctcatctagaggctgaacgcgaaggtcgtaaccccgaccgtcctcctccaaacgccacc
gtgttggcaggcctgcagggtgggctcgatccagacgaggactccagcaggaagagggtg
accagaatctccagtcctgagaggtgggagatcaaacagatgatatcatcaggagtaata
gataagagtgagttgccagactttgatgaggagacaggattgttgcccaaagacgaagat
ggtgaggctgacatagaaatagagctggtagaagaagagccaccgttcctgcaaggtcat
ggccgcgcactgcacgacctgtctccagtcaggattgtcaagaaccctgacggatctctt
gctcaagctgccatgatgcagtcagctctctccaaagaaagaagagaacagaagatgttg
cagagggaacaagagatggagagcctccccatgggtctcaacaagaactggatagatccc
ctcccagagagcgacggtagagctctagctgctaacatgagagggactggcataactcct
caggatctgcctgaatggaagaagcatgtgatcggtggcaaaaagtcgtcatttggcaag
aaaactaatttgtcattgttggagcagaggcagtcactgcctatttataagctgagggat
gaattgacgaaggctgtagccgacaaccaaatcctgatagttatcggagagacagggtcg
ggtaagacgacacagatcacccagtacctggcggagtgtggcctgacggcgcgcggtaag
atagcgtgcacccagcccaggagagtggccgccatgtccgtcgccaagcgagtcgctgag
gagttcgggtgccggctcggacaggaagtcgggtacaccatccgtttcgaagactgcacc
agccctgagactgttatcaaatacatgacagacggtatgttactccgcgagtgtctcatg
gacctcgacttgaagagctactcagtgatcatgttggacgaggctcacgagcgcaccata
cacactgacgtccttttcggtctactcaagcaggctgtccagaaacgaccagaactcaag
ttgattgtcacatccgctacattagacgccgtcaaattctcacagtacttcttcgaagct
cctattttcaccatccctggtcgtaccttcccggtagaagttttgtacactaaggaacca
gaaacggattatctggatgcatccttgatcactgtgatgcaaattcatttaagggaacct
ccgggagatatcttgctcttcttgactggtcaggaggagattgacactgcttgtgagatc
ttatacgagagaatgaagtctctaggccctgatgtgccagaactcatcatcctacctgta
tattcagctctgccgtctgaaatgcaaacgcgtatcttcgaaccagcacctccaggttcc
agaaaagtcgtcatagctaccaacattgctgaaacttcgttgactatagacggaatttat
tacgtggtcgaccctggctttgtgaagcaaaaagtttataactcgaagactggtatggac
tccttggtggttacaccgatttcgcaggctgcagccaagcagagagcaggtcgtgcgggt
cgtacaggcccgggcaagtgctaccggctgtacaccgagcgtgcgtacagggacgagatg
ttgcccactccagtaccagagatacaacgcaccaatcttgctaccactgtgttgcaactg
aagacgatgggtatcaacgacctccttcacttcgacttcatggacgcgcctcccgtcgag
tctctcatcatggcgctagaacagctgcactccttgtccgcgctcgattctgaaggatta
ctgactaggcttgggcgacggatggcggaattcccgctcgaacccaatctgtccaaaatc
ttgatcatgtcagtagcactgcagtgttcggatgagattctaacaatagtgtcgatgttg
agcgtgcagaatgtgttctatcgtcccaaagataagcaagcattagcagatcagaagaaa
gccaagttcaaccagccggagggagaccacctcactttactggcagtctacaatagctgg
agaaacaacaagttctctaacgcatggtgctatgagaactttgtacagatacgtacactg
aaacgtgcgcaggacgtacggaaacaattgttagggattatggataggcacaagttggac
gtggtatcggcgggaaagaacacagttcgcatccagaaaacgatatgttccggtttcttc
aggaacgcggccaagaaggacccacaggagggctatagaactctcgtcgacagccaagtg
gtctacatacatccctctagtgcgctcttcaatagacaacctgaatgggttatctaccac
gagctcgtacaaacaacaaaggagtacatgcgtgaggtgactaccatcgatccaaaatgg
ctggtggagttcgcaccggcgttcttcaagttctccgacccgaccaaactgtccaagttc
aagaagaaccagaggctagaacctctttacaataaatacgaagaaccaaacgcctggaga
atatccagggtacgcaggagacgaaactaa
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